RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CARD16Q5EG05 197 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 EFHC2Q5JST6 749 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 RWDD4Q6NW29 188 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 NEK5Q6P3R8 708 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 ADAT2Q7Z6V5 191 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 PRPF39Q86UA1 669 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 IQCHQ86VS3 1027 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 ARFGAP1Q8N6T3 406 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 MFSD2AQ8NA29 543 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 TMEM145Q8NBT3 493 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 ADAMTS14Q8WXS8 1223 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 SKA1Q96BD8 255 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 SERAC1Q96JX3 654 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 PHF12Q96QT6 1004 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 ELF4Q99607 663 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 HEPHQ9BQS7 1158 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 HAUS4Q9H6D7 363 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 CBX8Q9HC52 389 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 AASDHPPTQ9NRN7 309 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 TOR4AQ9NXH8 423 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 IL36AQ9UHA7 158 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 DNAI1Q9UI46 699 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 AKAP13Q12802 2813 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 COL5A1P20908 1838 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 TMEM191CA6NGB0 347 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 C1QTNF9BB2RNN3 333 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 TLR4O00206 839 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ATMINO43313 823 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 KDELR3O43731 214 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 RAMP2O60895 175 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 RNGTTO60942 597 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 GSRP00390 522 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 PROS1P07225 676 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 C1QTNF9P0C862 333 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ITGB7P26010 798 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 EPHB2P29323 1055 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 MAT2AP31153 395 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 HTR7P34969 479 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 GRK6P43250 576 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 RECQLP46063 649 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 RXRGP48443 463 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 CCNHP51946 323 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 GEMIN4P57678 1058 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 YBEYP58557 167 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 CCDC15Q0P6D6 951 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 OVGP1Q12889 678 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 POLD3Q15054 466 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ZNF284Q2VY69 593 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 SETMARQ53H47 684 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ARSIQ5FYB1 569 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 SFMBT2Q5VUG0 894 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 SCYL2Q6P3W7 929 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 DCUN1D2Q6PH85 259 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 UNQ6494/PRO21346Q6UXR6 183 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 CYP4V2Q6ZWL3 525 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ERN2Q76MJ5 926 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 KANSL1Q7Z3B3 1105 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 TMC6Q7Z403 805 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 SLCO6A1Q86UG4 719 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 LUZP1Q86V48 1076 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 HORMAD1Q86X24 394 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 DNAAF5Q86Y56 855 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 UMODL1-AS1Q8N2C9 162 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 OR2AP1Q8NGE2 309 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 GRIN3AQ8TCU5 1115 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 RHBDD1Q8TEB9 315 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 FNIP1Q8TF40 1166 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 SETD7Q8WTS6 366 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 CDC6Q99741 560 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ERVMER34-1Q9H9K5 563 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 GDF3Q9NR23 364 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 PARVAQ9NVD7 372 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 KLK13Q9UKR3 277 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ZFR2Q9UPR6 939 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 ARID1BQ8NFD5 2236 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-209ENST00000506632 TRPM6Q9BX84 2022 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 A0A1W2PQJ5 194 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 A0A1W2PQU0 124 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 ZSCAN5CA6NGD5 496 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 TMCO5BA8MYB1 307 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 EIF3CLB5ME19 914 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 PRAMEF26H0Y7S4 382 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 YKT6O15498 198 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 FGF10O15520 208 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 AP1G1O43747 822 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 SERPINC1P01008 464 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 FTLP02792 175 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 ATXN1LP0C7T5 689 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 ADRB3P13945 408 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 FECHP22830 423 aa9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 EPHA8P29322 1005 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-209ENST00000506632 NEK3P51956 506 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms