RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZBTB41Q5SVQ8 909 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 HMBOX1Q6NT76 420 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 NEPROQ6NW34 567 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 FAM117BQ6P1L5 589 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 ERO1BQ86YB8 467 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 TTC39CQ8N584 583 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 OR2T34Q8NGX1 318 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 URGCPQ8TCY9 931 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 ACDQ96AP0 544 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 MAGED4Q96JG8 741 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF347Q96SE7 839 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 XYLT2Q9H1B5 865 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 NOL11Q9H8H0 719 aaKnown RBP16.11■□□□□ 0.17
SCLT1-208ENST00000506368 LRRC40Q9H9A6 602 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 LRRC4Q9HBW1 653 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 CCM2LQ9NUG4 571 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-208ENST00000506368 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
SCLT1-208ENST00000506368 LRRIQ4A6NIV6 560 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 NPHS1O60500 1241 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 DGKIO75912 1065 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 MICAL2O94851 1124 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CSPG5O95196 566 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CELF2O95319 508 aaKnown RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 MAP4P27816 1152 aaKnown RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CCND2P30279 289 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 GPD2P43304 727 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 GRIA4P48058 902 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 EFNA5P52803 228 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 SNX16P57768 344 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ATP1A4Q13733 1029 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 LRP8Q14114 963 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 INPP5AQ14642 412 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF846Q147U1 533 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 OXA1LQ15070 435 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 DPYSL2Q16555 572 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 GPR107Q5VW38 600 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 OGFOD2Q6N063 350 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 OLFML1Q6UWY5 402 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 DHFR2Q86XF0 187 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 LEMD2Q8NC56 503 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 HTR3CQ8WXA8 447 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ANKRD36BP1Q96IX9 119 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 TAAR1Q96RJ0 339 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 HGH1Q9BTY7 390 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 SNX25Q9H3E2 840 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CYP3A43Q9HB55 503 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 PKD2L2Q9NZM6 624 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 KIAA1257Q9ULG3 409 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 PSAT1Q9Y617 370 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 DOCK5Q9H7D0 1870 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 TESPA1A2RU30 521 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF839A8K0R7 811 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 STX16-NPEPL1H3BU86 382 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CLPXO76031 633 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 DDHD2O94830 711 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CYP2F1P24903 491 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 TCF7P36402 384 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 RXRGP48443 463 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 POLD2P49005 469 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 HLCSP50747 726 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 PMS2P3Q13401 168 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 KIZQ2M2Z5 673 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ARL13AQ5H913 290 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF667Q5HYK9 610 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 NXNQ6DKJ4 435 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 SWSAP1Q6NVH7 229 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CYP2U1Q7Z449 544 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 PELI3Q8N2H9 469 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ROPN1LQ96C74 230 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 NPAS2Q99743 824 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 SLC25A23Q9BV35 468 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 ACE2Q9BYF1 805 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 WDR12Q9GZL7 423 aaKnown RBP16.1■□□□□ 0.17
SCLT1-208ENST00000506368 POLR1BQ9H9Y6 1135 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 SMOXQ9NWM0 555 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 CACNA2D2Q9NY47 1150 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 TMEM181Q9P2C4 612 aa16.1■□□□□ 0.17
SCLT1-208ENST00000506368 OGTO15294 1046 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 MYL3P08590 195 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 IL10P22301 178 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 MGAT1P26572 445 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PRAMEP78395 509 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 FGD3Q5JSP0 725 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 TMTC4Q5T4D3 741 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PRMT9Q6P2P2 845 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 XKR5Q6UX68 686 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PLD6Q8N2A8 252 aaKnown RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 OR13F1Q8NGS4 319 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 CXorf38Q8TB03 319 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 ZSCAN18Q8TBC5 510 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PGBD4Q96DM1 585 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 SNRNP25Q9BV90 132 aaKnown RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 MRPL4Q9BYD3 311 aaKnown RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms