RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 C9IYK1 514 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 HHLA1C9JL84 531 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 H3BNX3 289 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 STX16-NPEPL1H3BU86 382 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 DLX3O60479 287 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 PMPCBO75439 489 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 CABYRO75952 493 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ENO3P13929 434 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 HADHAP40939 763 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 GJA9P57773 515 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 FRG1Q14331 258 aaKnown RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 CNGA3Q16281 694 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 INTS6LQ5JSJ4 861 aaKnown RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 PCID2Q5JVF3 399 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 PKN3Q6P5Z2 889 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 DCLRE1AQ6PJP8 1040 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ISLR2Q6UXK2 745 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 BHLHA9Q7RTU4 235 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 HASPINQ8TF76 798 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 UPF1Q92900 1129 aaKnown RBP eCLIP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 RCN3Q96D15 328 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 SMARCD1Q96GM5 515 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZNF419Q96HQ0 510 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 TRAPPC9Q96Q05 1148 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 TBL1YQ9BQ87 522 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 SUDS3Q9H7L9 328 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 FLRT1Q9NZU1 646 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 XPR1Q9UBH6 696 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 CDYLQ9Y232 598 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ANKRD6Q9Y2G4 727 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 AAR2Q9Y312 384 aaKnown RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 SHROOM3Q8TF72 1996 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 DICER1Q9UPY3 1922 aaKnown RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 TSC2P49815 1807 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 FAM95CA0A1B0GW59 222 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ARL5CA6NH57 179 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 STMN1P16949 149 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 TCN1P20061 433 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PPARGP37231 505 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ALDH1A3P47895 512 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 SCNN1GP51170 649 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 THOP1P52888 689 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 RAB10P61026 200 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 MRPS22P82650 360 aaKnown RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 FOLH1Q04609 750 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PRKAA1Q13131 559 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ART3Q13508 389 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 SEPT6Q14141 434 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 FLOT2Q14254 428 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 TIGD5Q53EQ6 642 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 LRRC8EQ6NSJ5 796 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 C16orf89Q6UX73 402 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 RNF135Q8IUD6 432 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 MFSD6LQ8IWD5 586 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 LSMEM2Q8N112 164 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 TMEM86AQ8N2M4 240 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ATPAF2Q8N5M1 289 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 RP9Q8TA86 221 aaKnown RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 RDH11Q8TC12 318 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 STYXQ8WUJ0 223 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ELMO2Q96JJ3 720 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 SERPINI1Q99574 410 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 FICDQ9BVA6 458 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CHST12Q9NRB3 414 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 FAM105AQ9NUU6 356 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 NSMCE4AQ9NXX6 385 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 STK39Q9UEW8 545 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CPA4Q9UI42 421 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 MID2Q9UJV3 735 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 NUDT5Q9UKK9 219 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ST3GAL5Q9UNP4 418 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 SBF1O95248 1867 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 AP3B1O00203 1094 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CAPN15O75808 1086 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZNF189O75820 626 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PGK1P00558 417 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CTSHP09668 335 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 HNRNPLP14866 589 aaKnown RBP eCLIP7.72□□□□□ -1.172e-6■■■□□ 18.3
PPARGC1A-204ENST00000506055 XRCC1P18887 633 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CHRNA4P43681 627 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 NUMBP49757 651 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CPT1AP50416 773 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 COG7P83436 770 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PDK3Q15120 406 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PCSK7Q16549 785 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CCL14Q16627 93 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 SH2D4BQ5SQS7 431 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZNF470Q6ECI4 717 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PM20D1Q6GTS8 502 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZNF280DQ6N043 979 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 BNC2Q6ZN30 1099 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 ST13P4Q8IZP2 240 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 GALNT15Q8N3T1 639 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PNPLA1Q8N8W4 532 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 FAM156AQ8NDB6 213 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 DQX1Q8TE96 717 aaKnown RBP7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 MYLPFQ96A32 169 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 CNDP1Q96KN2 507 aa7.72□□□□□ -1.17
PPARGC1A-204ENST00000506055 PTPN18Q99952 460 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms