RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ATP11CQ8NB49 1132 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 C18orf8Q96DM3 657 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 CCDC114Q96M63 670 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 CCNL2Q96S94 520 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 TBCBQ99426 244 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 NPY6RQ99463 290 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 C2orf49Q9BVC5 232 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 NLGN3Q9NZ94 848 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 SARDHQ9UL12 918 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 PCDHGA8Q9Y5G5 932 aa16.38■□□□□ 0.21
PDLIM7-213ENST00000505074 NEMP2A6NFY4 417 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 PLRG1O43660 514 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ATP9BO43861 1147 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 RNGTTO60942 597 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 PIAS2O75928 621 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 F9P00740 461 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 THEGLP0DJG4 465 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 GIMD1P0DJR0 217 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 MYF5P13349 255 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ERCC5P28715 1186 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 KCNMA1Q12791 1236 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 CNTN1Q12860 1018 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 CLN3Q13286 438 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ALFQ53S48 1182 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 C2CD6Q53TS8 623 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 MIIPQ5JXC2 388 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 OTUD1Q5VV17 481 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ARL14Q8N4G2 192 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 IFI44Q8TCB0 444 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ALG14Q96F25 216 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ATXN7L3BQ96GX2 97 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 DYRK4Q9NR20 520 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 STARD5Q9NSY2 213 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ARHGEF38Q9NXL2 777 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 ANKMY1Q9P2S6 941 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 KIF26BQ2KJY2 2108 aa16.37■□□□□ 0.21
PDLIM7-213ENST00000505074 CDRT15L2A8MXV6 281 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 KPNA3O00505 521 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 ALOX15BO15296 676 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SUV39H1O43463 412 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SNAP91O60641 907 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SRGAP2O75044 1071 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SRCP12931 536 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 CXCR3P49682 368 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 NFKB2Q00653 900 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 LINC00303Q3SY05 128 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SMYD5Q6GMV2 418 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 FOXR1Q6PIV2 292 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 XYLT1Q86Y38 959 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 FAM131CQ96AQ9 280 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 MYOCQ99972 504 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 DUSP23Q9BVJ7 150 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 ANLNQ9NQW6 1124 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 TMPRSS4Q9NRS4 437 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 WDR70Q9NW82 654 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 TAB2Q9NYJ8 693 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 MPP6Q9NZW5 540 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 SEPT3Q9UH03 358 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 VPS51Q9UID3 782 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 CA5BQ9Y2D0 317 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 TBC1D30Q9Y2I9 924 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 ENTPD2Q9Y5L3 495 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 OR51B4Q9Y5P0 310 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 COL12A1Q99715 3063 aa16.36■□□□□ 0.21
PDLIM7-213ENST00000505074 A0A1W2PNU3 283 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 MCF2LO15068 1137 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 MT-CO1P00395 513 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 TPM2P07951 284 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 MMEP08473 750 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 SFTPCP11686 197 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 UCHL3P15374 230 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 RRM1P23921 792 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 OR1E1P30953 314 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 FLT3P36888 993 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 MLLT3P42568 568 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 RECQLP46063 649 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 SLC25A52Q3SY17 297 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 AGBL4Q5VU57 503 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 NAA35Q5VZE5 725 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 LINGO4Q6UY18 593 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 USP53Q70EK8 1073 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 GRIN3AQ8TCU5 1115 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 CPA5Q8WXQ8 436 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 PRR11Q96HE9 360 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 CFAP57Q96MR6 1250 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 SPON2Q9BUD6 331 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 PPM1HQ9ULR3 514 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 AHCTF1Q8WYP5 2266 aa16.35■□□□□ 0.21
PDLIM7-213ENST00000505074 LY6G6EA0A0G2JKS1 128 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 F8VZ95 297 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 K7ERQ8 282 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 SCAMP1O15126 338 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 ENDOD1O94919 500 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 GJB6O95452 261 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 LSM8O95777 96 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 TGM2P21980 687 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms