RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CCDC122Q5T0U0 273 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 ERMARDQ5T6L9 678 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 PCDH20Q8N6Y1 951 aaKnown RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 SETD7Q8WTS6 366 aaKnown RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 HSPH1Q92598 858 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 SYN2Q92777 582 aaPredicted RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 KCTD15Q96SI1 283 aaPredicted RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 HEPHQ9BQS7 1158 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 ORAI3Q9BRQ5 295 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 NUP85Q9BW27 656 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 ZDHHC5Q9C0B5 715 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 ISCUQ9H1K1 167 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 NOL6Q9H6R4 1146 aaKnown RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 DNAAF2Q9NVR5 837 aaKnown RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 HECAQ9UBI9 543 aaPredicted RBP14.52□□□□□ -0.09
HOXC9-202ENST00000504557 CA5BQ9Y2D0 317 aa14.52□□□□□ -0.09
HOXC9-202ENST00000504557 KDELR3O43731 214 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 RNGTTO60942 597 aaKnown RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 CEACAM1P13688 526 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 CD59P13987 128 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 TCF4P15884 667 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 PRLRP16471 622 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 CSRP1P21291 193 aaKnown RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 GJC1P36383 396 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 EIF4A3P38919 411 aaKnown RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 GRIA4P48058 902 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 CCR5P51681 352 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 AIF1P55008 147 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 GEMIN4P57678 1058 aaKnown RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 RACK1P63244 317 aaKnown RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 FAM193AP78312 1265 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 SIM1P81133 766 aaPredicted RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 SLC20A2Q08357 652 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 PIP5KL1Q5T9C9 394 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 IL27RAQ6UWB1 636 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 PRPF39Q86UA1 669 aaKnown RBP14.51□□□□□ -0.09
HOXC9-202ENST00000504557 TMIEQ8NEW7 156 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 ARHGEF26Q96DR7 871 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 IQCDQ96DY2 449 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 PPP1R16AQ96I34 528 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 EXOC2Q96KP1 924 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 CEP44Q9C0F1 390 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 DEF6Q9H4E7 631 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 TM7SF3Q9NS93 570 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 ARHGAP20Q9P2F6 1191 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 ANAPC7Q9UJX3 599 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 PCDHB9Q9Y5E1 797 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 WASF2Q9Y6W5 498 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 LRRK1Q38SD2 2015 aa14.51□□□□□ -0.09
HOXC9-202ENST00000504557 A0A1W2PQU0 124 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 H0Y8X5 98 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 DFFAO00273 331 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 SLC31A1O15431 190 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 FGF10O15520 208 aaPredicted RBP14.5□□□□□ -0.09
HOXC9-202ENST00000504557 SLC7A4O43246 635 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 LRCH4O75427 683 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 TMCC1O94876 653 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 WNT1P04628 370 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 UGT2B4P06133 528 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 SPINK2P20155 84 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 CD38P28907 300 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 TAS2R38P59533 333 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 RHOAP61586 193 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 LRRC73Q5JTD7 316 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 SPECC1LQ69YQ0 1117 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 ALKBH5Q6P6C2 394 aaKnown RBP14.5□□□□□ -0.09
HOXC9-202ENST00000504557 FBXL19Q6PCT2 694 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 ERN2Q76MJ5 926 aaKnown RBP14.5□□□□□ -0.09
HOXC9-202ENST00000504557 NAXDQ8IW45 347 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 FZD3Q9NPG1 666 aa14.5□□□□□ -0.09
HOXC9-202ENST00000504557 GOLGA8CPA6NN73 597 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 GJB3O75712 270 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 TPM1P09493 284 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 ERCC2P18074 760 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 NEK3P51956 506 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 ADKP55263 362 aaKnown RBP14.49□□□□□ -0.09
HOXC9-202ENST00000504557 SNRPD1P62314 119 aaKnown RBP14.49□□□□□ -0.09
HOXC9-202ENST00000504557 CCDC15Q0P6D6 951 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 SERINC3Q13530 473 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 PARP15Q460N3 678 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 SLC45A4Q5BKX6 768 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 RFX8Q6ZV50 586 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 CYP4V2Q6ZWL3 525 aaPredicted RBP14.49□□□□□ -0.09
HOXC9-202ENST00000504557 PIP4P1Q86T03 277 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 OR2AP1Q8NGE2 309 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 FNIP1Q8TF40 1166 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 SKA1Q96BD8 255 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 SLC39A8Q9C0K1 460 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 RETREG1Q9H6L5 497 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 PREBQ9HCU5 417 aa14.49□□□□□ -0.09
HOXC9-202ENST00000504557 ZNHIT6Q9NWK9 470 aaKnown RBP14.49□□□□□ -0.09
HOXC9-202ENST00000504557 ZSCAN5CA6NGD5 496 aaPredicted RBP14.48□□□□□ -0.09
HOXC9-202ENST00000504557 TMEM110-MUSTN1A8MSY1 372 aa14.48□□□□□ -0.09
HOXC9-202ENST00000504557 WASH4PA8MWX3 477 aa14.48□□□□□ -0.09
HOXC9-202ENST00000504557 J3KR12 359 aa14.48□□□□□ -0.09
HOXC9-202ENST00000504557 NEMP1O14524 444 aa14.48□□□□□ -0.09
HOXC9-202ENST00000504557 VILLO15195 856 aa14.48□□□□□ -0.09
HOXC9-202ENST00000504557 IGSF6O95976 241 aa14.48□□□□□ -0.09
HOXC9-202ENST00000504557 TOP3BO95985 862 aaKnown RBP14.48□□□□□ -0.09
HOXC9-202ENST00000504557 ADRB3P13945 408 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms