RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 PTPN13Q12923 2485 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 TCRBV7S2A1N4TA0A589 114 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CAPN8A6NHC0 703 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 K7ERQ8 282 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CBX4O00257 560 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 DFFAO00273 331 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 MFSD11O43934 449 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 BNIP3LO60238 219 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 OPHN1O60890 802 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CLDN11O75508 207 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 ATP1A1P05023 1023 aaKnown RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 HLA-EP13747 358 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CTNNA2P26232 953 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CTNNA1P35221 906 aaKnown RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 DHPSP49366 369 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 PEX5P50542 639 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 AIF1P55008 147 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 GNG11P61952 73 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 SLC14A1Q13336 389 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 C5orf22Q49AR2 442 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 NCBP2-AS2Q69YL0 99 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CCDC117Q8IWD4 279 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 SYCE1Q8N0S2 351 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 TERB1Q8NA31 727 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 RPLP0P6Q8NHW5 317 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 FIBINQ8TAL6 211 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 TSC1Q92574 1164 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 ALG14Q96F25 216 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 WDR24Q96S15 920 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 NCAPGQ9BPX3 1015 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 CATSPERBQ9H7T0 1116 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 TMEM248Q9NWD8 314 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 DDX56Q9NY93 547 aaKnown RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 SMARCAL1Q9NZC9 954 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 KIAA1522Q9P206 1035 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 PPARGC1AQ9UBK2 798 aaKnown RBP9.25□□□□□ -0.93
NR1I3-219ENST00000504010 VPS28Q9UK41 221 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 FBXO10Q9UK96 956 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 PCDHA3Q9Y5H8 950 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 HEY1Q9Y5J3 304 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 RAD54BQ9Y620 910 aa9.25□□□□□ -0.93
NR1I3-219ENST00000504010 SHROOM3Q8TF72 1996 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 KIAA1549LQ6ZVL6 1849 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 TNRC6BQ9UPQ9 1833 aaKnown RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 A0A087WV48 116 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 RASA4BC9J798 803 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 J3KR12 359 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 KCNK3O14649 394 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 FANCGO15287 622 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 RASA4O43374 803 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 CST8O60676 142 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ALDH1A2O94788 518 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 KLF8O95600 359 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 MT-CO1P00395 513 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 VAV1P15498 845 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 PECAM1P16284 738 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 DEKP35659 375 aaKnown RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ETFBP38117 255 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 GRIA2P42262 883 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 CDKN2BP42772 138 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 PAPOLAP51003 745 aaKnown RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 RWDD2BP57060 319 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 FOXK1P85037 733 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 GNA12Q03113 381 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 GBE1Q04446 702 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 SLC10A2Q12908 348 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 BYSLQ13895 437 aaKnown RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 POLD3Q15054 466 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 PDK2Q15119 407 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 RPS6KA1Q15418 735 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 PLEKHG6Q3KR16 790 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 LRRC38Q5VT99 294 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 PEAR1Q5VY43 1037 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 TMCO3Q6UWJ1 677 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ZNF662Q6ZS27 426 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 CACUL1Q86Y37 369 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ARHGAP12Q8IWW6 846 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 PLPP6Q8IY26 295 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 KATNAL2Q8IYT4 538 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ALLCQ8N6M5 410 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 KIAA1958Q8N8K9 716 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 USP33Q8TEY7 942 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ARHGEF2Q92974 986 aaKnown RBP9.24□□□□□ -0.93
NR1I3-219ENST00000504010 HES6Q96HZ4 224 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 SPACA7Q96KW9 195 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 RNF157Q96PX1 679 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ALS2CR12Q96Q35 445 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 FEM1AQ9BSK4 669 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 TLR10Q9BXR5 811 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ATP13A1Q9HD20 1204 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 ELOVL2Q9NXB9 296 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 LCMT1Q9UIC8 334 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 SLCO3A1Q9UIG8 710 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 SLC6A14Q9UN76 642 aa9.24□□□□□ -0.93
NR1I3-219ENST00000504010 APOBEC2Q9Y235 224 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms