RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 PSMD13Q9UNM6 376 aa13.43□□□□□ -0.26
SPCS3-201ENST00000503362 IPPQ9Y573 584 aa13.43□□□□□ -0.26
SPCS3-201ENST00000503362 SNX10Q9Y5X0 201 aa13.43□□□□□ -0.26
SPCS3-201ENST00000503362 ARAP2Q8WZ64 1704 aa13.43□□□□□ -0.26
SPCS3-201ENST00000503362 FAM159BA6NKW6 160 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 VCLP18206 1134 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 CD86P42081 329 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 HARS2P49590 506 aaKnown RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 CAND1Q86VP6 1230 aaKnown RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 DSELQ8IZU8 1212 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SPATA22Q8NHS9 363 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SIGLEC10Q96LC7 697 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 MRPL57Q9BQC6 102 aaKnown RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 C6orf203Q9P0P8 240 aaPredicted RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 CNTN6Q9UQ52 1028 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 POMPQ9Y244 141 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 A0A087X1B8 175 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 E7ESA3 106 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SERPINF2P08697 491 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 OR1E1P30953 314 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 GRIA3P42263 894 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 CDH13P55290 713 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 CDC16Q13042 620 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 FRG1Q14331 258 aaKnown RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 PFKFB4Q16877 469 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 OTUD3Q5T2D3 398 aaPredicted RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 ZNF555Q8NEP9 628 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 MYLPFQ96A32 169 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 PRR11Q96HE9 360 aaPredicted RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 FAM50BQ9Y247 325 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 LRRC42Q9Y546 428 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 F5H5T6 163 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 KLF11O14901 512 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 LGR5O75473 907 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 PTPN3P26045 913 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 MSLNQ13421 630 aaPredicted RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SNX17Q15036 470 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 CGB2Q6NT52 195 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 TREML1Q86YW5 311 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 FBXO39Q8N4B4 442 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 TOP6BLQ8N6T0 577 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SNX19Q92543 992 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 NXNL1Q96CM4 212 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SERPINB11Q96P15 392 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 TMPRSS4Q9NRS4 437 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 PPM1HQ9ULR3 514 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 PCDHB12Q9Y5F1 795 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 C15orf38-AP3S2A0A0A6YYH1 394 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
SPCS3-201ENST00000503362 DUSP28Q4G0W2 176 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 NCBP2-AS2Q69YL0 99 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 ARPINQ7Z6K5 226 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 RDH11Q8TC12 318 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 DCUN1D5Q9BTE7 237 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 EBF3Q9H4W6 596 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 TBC1D23Q9NUY8 699 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 RBPJLQ9UBG7 517 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 SFMBT1Q9UHJ3 866 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 MYRFQ9Y2G1 1151 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 MFHAS1Q9Y4C4 1052 aa13.42□□□□□ -0.26
SPCS3-201ENST00000503362 TRAFD1O14545 582 aaPredicted RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 CLASP2O75122 1294 aaKnown RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SNRPB2P08579 225 aaKnown RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 PRKCHP24723 683 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 RPL5P46777 297 aaKnown RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 PSEN1P49768 467 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 LILRA4P59901 499 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 OLIG2Q13516 323 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 CTXN3Q4LDR2 81 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 OR52K2Q8NGK3 314 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 FAM162AQ96A26 154 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SNX27Q96L92 541 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 TRIM54Q9BYV2 358 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 MAF1Q9H063 256 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 RUBCNLQ9H714 662 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 USP29Q9HBJ7 922 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 ABCC13Q9NSE7 274 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 CDH9Q9ULB4 789 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 LAMB1P07942 1786 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 TRIM38O00635 465 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 NMBRP28336 390 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 RGS2P41220 211 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 RGS4P49798 205 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 NFE2Q16621 373 aaPredicted RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SYPL2Q5VXT5 272 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SKA1Q96BD8 255 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 PPP1R10Q96QC0 940 aaKnown RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 ASPSCR1Q9BZE9 553 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 FZD10Q9ULW2 581 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 ECM29Q5VYK3 1845 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 AHDC1Q5TGY3 1603 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms