RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	CCR2	P41597	374 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	NOMO3	P69849	1222 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	CDK17	Q00537	523 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	ITK	Q08881	620 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	ADGRF1	Q5T601	910 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	SNX30	Q5VWJ9	437 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	NAA35	Q5VZE5	725 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	GRASP	Q7Z6J2	395 aa	Predicted RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	TMEM150A	Q86TG1	271 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	PIGZ	Q86VD9	579 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	VPS36	Q86VN1	386 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	WDTC1	Q8N5D0	677 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	TDRD5	Q8NAT2	981 aa	Known RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	CLRN3	Q8NCR9	226 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	TMEM35B	Q8NCS4	154 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	C1orf131	Q8NDD1	294 aa	Known RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	STKLD1	Q8NE28	680 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	OLIG1	Q8TAK6	271 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	SLC35F5	Q8WV83	523 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	OVCA2	Q8WZ82	227 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	PDLIM2	Q96JY6	352 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	SCYL1	Q96KG9	808 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	PCDHB18P	Q96TA0	734 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	ELF4	Q99607	663 aa	Predicted RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	CHP1	Q99653	195 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	UBXN6	Q9BZV1	441 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	HCFC1R1	Q9NWW0	138 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	COMMD8	Q9NX08	183 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	EHD2	Q9NZN4	543 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	UXT	Q9UBK9	157 aa	Predicted RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	TRHDE	Q9UKU6	1024 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	G3BP2	Q9UN86	482 aa	Known RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	PATJ	Q8NI35	1801 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	MTCL1	Q9Y4B5	1905 aa	Known RBP	7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	BRWD1	Q9NSI6	2320 aa		7.72	□□□□□ -1.17
GARNL3-222	ENST00000498801	FAM90A27P	A6NNH2	459 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	DDX3X	O00571	662 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	OLFM2	O95897	454 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	MPO	P05164	745 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	LAMP2	P13473	410 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	FCAR	P24071	287 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	CDC25C	P30307	473 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	GJA4	P35212	333 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	PPP3CC	P48454	512 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	RPL34	P49207	117 aa	Known RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	RGS7	P49802	495 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	TUB	P50607	506 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	SLC5A3	P53794	718 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	PDCL	Q13371	301 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	HTR4	Q13639	388 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	TAF12	Q16514	161 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	RAB41	Q5JT25	222 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	ARTN	Q5T4W7	220 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	PMF1	Q6P1K2	205 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	RPTN	Q6XPR3	784 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	DENND5B	Q6ZUT9	1274 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	GAREM2	Q75VX8	874 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	PDZD4	Q76G19	769 aa	Predicted RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	GPRIN1	Q7Z2K8	1008 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	CCDC186	Q7Z3E2	898 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	MILR1	Q7Z6M3	343 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	TRIM48	Q8IWZ4	208 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	NUP93	Q8N1F7	819 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	SCML4	Q8N228	414 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	SCAMP5	Q8TAC9	235 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	SLC30A5	Q8TAD4	765 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	CPA5	Q8WXQ8	436 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	FGF13	Q92913	245 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	PPP1R13B	Q96KQ4	1090 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	HSFY1	Q96LI6	401 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	ZNF512	Q96ME7	567 aa	Predicted RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	NOX5	Q96PH1	765 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	MYADM	Q96S97	322 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	SMAD5	Q99717	465 aa	Known RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	BAG1	Q99933	345 aa	Predicted RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	DEF6	Q9H4E7	631 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	LRRC4	Q9HBW1	653 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	ZNF334	Q9HCZ1	680 aa	Predicted RBP	7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	CD320	Q9NPF0	282 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	RIC8B	Q9NVN3	520 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	OBP2A	Q9NY56	170 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	IGSF9	Q9P2J2	1179 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801	CYTH4	Q9UIA0	394 aa		7.71	□□□□□ -1.18
GARNL3-222	ENST00000498801		A0A087X0T9	212 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	FAM170A	A1A519	330 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801		E5RJQ4	531 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801		K7ESF4	209 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	AKR1B10	O60218	316 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	BUB1B	O60566	1050 aa	Predicted RBP	7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	ECI2	O75521	394 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	RTN3	O95197	1032 aa	Predicted RBP	7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	PTMA	P06454	111 aa	Known RBP	7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	ZDHHC11B	P0C7U3	371 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	FAM228B	P0C875	321 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	UNG	P13051	313 aa	Predicted RBP	7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	CEBPB	P17676	345 aa		7.7	□□□□□ -1.18
GARNL3-222	ENST00000498801	MMP8	P22894	467 aa		7.7	□□□□□ -1.18

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