RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RENBPP51606 427 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 MAXP61244 160 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 TUBB2AQ13885 445 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 STARD3Q14849 445 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 CYP1B1Q16678 543 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 INO80DQ53TQ3 878 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 PKN3Q6P5Z2 889 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 PCDH20Q8N6Y1 951 aaKnown RBP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 CCDC89Q8N998 374 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 IL17RCQ8NAC3 791 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 FATE1Q969F0 183 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 AGAP3Q96P47 875 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 CEP44Q9C0F1 390 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 RBM22Q9NW64 420 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 CEP192Q8TEP8 1941 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 PLXND1Q9Y4D7 1925 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 LRRK1Q38SD2 2015 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 SCN8AQ9UQD0 1980 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 CXorf51AA0A1B0GTR3 108 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 NPC1O15118 1278 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 MUSKO15146 869 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 ATP9BO43861 1147 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 DCNP07585 359 aaKnown RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 CHRNA3P32297 505 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 COILP38432 576 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 RGRP47804 291 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 WASHC5Q12768 1159 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 HNRNPDQ14103 355 aaKnown RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 CYTH1Q15438 398 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 ARHGEF18Q6ZSZ5 1173 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF687Q8N1G0 1237 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 PGBD5Q8N414 524 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 OR2AP1Q8NGE2 309 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 CCDC110Q8TBZ0 833 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 GRIN3AQ8TCU5 1115 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 GRK7Q8WTQ7 553 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 PSKH2Q96QS6 385 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 NELL2Q99435 816 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 IL12RB2Q99665 862 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 MGME1Q9BQP7 344 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 POLR1EQ9GZS1 481 aaKnown RBP13.78□□□□□ -0.2
CPNE1-227ENST00000498056 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 RSPH14Q9UHP6 348 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 MMP17Q9ULZ9 603 aa13.78□□□□□ -0.2
CPNE1-227ENST00000498056 SYNCRIPO60506 623 aaKnown RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 SIN3BO75182 1162 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 GJB3O75712 270 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 ECEL1O95672 775 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 GAS8O95995 478 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 GSRP00390 522 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 NFKB1P19838 968 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 ACTN2P35609 894 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 HSPA9P38646 679 aaKnown RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 VPS41P49754 854 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 DSC2Q02487 901 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 LMNB2Q03252 620 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 HNRNPA1L2Q32P51 320 aaKnown RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 HSF5Q4G112 596 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 ITPRIPL1Q6GPH6 555 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 PRUNE1Q86TP1 453 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 SYNPOQ8N3V7 929 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 TAB3Q8N5C8 712 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 MNS1Q8NEH6 495 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 KCNV2Q8TDN2 545 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 KRT12Q99456 494 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 VAT1Q99536 393 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 GABRG3Q99928 467 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 POLR3BQ9NW08 1133 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-227ENST00000498056 SIT1Q9Y3P8 196 aa13.77□□□□□ -0.21
CPNE1-227ENST00000498056 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ZBTB24O43167 697 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-227ENST00000498056 OPHN1O60890 802 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ADAM23O75077 832 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 COL9A1P20849 921 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 PSMB4P28070 264 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 PSMD8P48556 350 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 SCNN1BP51168 640 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms