RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 PBX2P40425 430 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 CHRNA4P43681 627 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 WNT3AP56704 352 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 MPP3Q13368 585 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 GPM6BQ13491 265 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 TEAD2Q15562 447 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 TUBB8Q3ZCM7 444 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 KDELC1Q6UW63 502 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 FCRL3Q96P31 734 aaPredicted RBP18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 MLXIPLQ9NP71 852 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 INTS9Q9NV88 658 aaKnown RBP18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 CCL26Q9Y258 94 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 IQANK1A0A1B0GTG1 560 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 CBX4O00257 560 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 LEFTY2O00292 366 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 ALDH1A2O94788 518 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 RHOP08100 348 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 MMP2P08253 660 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 NPY2RP49146 381 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 NTHL1P78549 312 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 TNK2Q07912 1038 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 MPP2Q14168 576 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 POU6F1Q14863 301 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 LRRC14Q15048 493 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 SLC5A9Q2M3M2 681 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 FSCBQ5H9T9 825 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 SPANXN3Q5MJ09 141 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 DENND5AQ6IQ26 1287 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 ZNF771Q7L3S4 317 aaPredicted RBP18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 ATXN2LQ8WWM7 1075 aaKnown RBP18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 MFSD3Q96ES6 412 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 SMC6Q96SB8 1091 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 POLR1EQ9GZS1 481 aaKnown RBP18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 CHRAC1Q9NRG0 131 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 SENP1Q9P0U3 644 aa18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 UBA2Q9UBT2 640 aaPredicted RBP18.07■□□□□ 0.48
CHRNA4-206ENST00000498043 AP3B1O00203 1094 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 KDELR3O43731 214 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 PTPN2P17706 415 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 EPHA5P54756 1037 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 CDH18Q13634 790 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 IHHQ14623 411 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 ADGRD2Q7Z7M1 963 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 RASSF3Q86WH2 238 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 FAM217AQ8IXS0 508 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 ARRDC2Q8TBH0 407 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 WFDC5Q8TCV5 224 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 TMA16Q96EY4 203 aaKnown RBP18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 ZNF599Q96NL3 588 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 KLF6Q99612 283 aaPredicted RBP18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 SEMA3CQ99985 751 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 HCFC2Q9Y5Z7 792 aa18.06■□□□□ 0.48
CHRNA4-206ENST00000498043 GOLGA8RI6L899 631 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 GFRA2O00451 464 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 MOSPD3O75425 235 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 LUC7L3O95232 432 aaKnown RBP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ERVK-10P10266 1014 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 KRT4P19013 534 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 AVPR1AP37288 418 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 BMPR2Q13873 1038 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 HTR3DQ70Z44 454 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 TMEM135Q86UB9 458 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 SLC25A41Q8N5S1 370 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 TDRD5Q8NAT2 981 aaKnown RBP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 TTC17Q96AE7 1141 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 CERS2Q96G23 380 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 SOX13Q9UN79 622 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 NOTCH4Q99466 2003 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 FAM237BA0A1B0GVD1 139 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 XYLBO75191 536 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 USP1O94782 785 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 MZF1P28698 734 aaPredicted RBP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 HOXA9P31269 272 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 SEC24CP53992 1094 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ERVK-21P61565 698 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ANKRD20A4Q4UJ75 823 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 RANBP10Q6VN20 620 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 TPGS1Q6ZTW0 290 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 MARK2Q7KZI7 788 aaKnown RBP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 SH3RF2Q8TEC5 729 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 DDI1Q8WTU0 396 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 CDKL2Q92772 493 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 EXOC2Q96KP1 924 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ZNF778Q96MU6 729 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 CINPQ9BW66 212 aaPredicted RBP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ACE2Q9BYF1 805 aaPredicted RBP18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 VPS45Q9NRW7 570 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 PLK2Q9NYY3 685 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ZNF180Q9UJW8 692 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ARHGAP26Q9UNA1 814 aa18.05■□□□□ 0.48
CHRNA4-206ENST00000498043 ZCWPW2A0A1B0GU75 182 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 ERICH4A6NGS2 130 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 FGF19O95750 216 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 NMBRP28336 390 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 CYS1Q717R9 158 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 RTL10Q7L3V2 364 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 GRASPQ7Z6J2 395 aaPredicted RBP18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 CMTM8Q8IZV2 173 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 RIN3Q8TB24 985 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms