RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZNF333Q96JL9 665 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 ZSCAN31Q96LW9 406 aaPredicted RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 COG8Q96MW5 612 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 TEFMQ96QE5 360 aaKnown RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 PYM1Q9BRP8 204 aaKnown RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 B3GNT4Q9C0J1 378 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 EBF3Q9H4W6 596 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 SIRT3Q9NTG7 399 aaPredicted RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 CD207Q9UJ71 328 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 SUFUQ9UMX1 484 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 ICKQ9UPZ9 632 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 DNAJC16Q9Y2G8 782 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 GPR52Q9Y2T5 361 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 RAP2CQ9Y3L5 183 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 PLA2R1Q13018 1463 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 ARHGAP5Q13017 1502 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 CROCC2H7BZ55 1655 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 GCC2Q8IWJ2 1684 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 ITSN2Q9NZM3 1697 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 RPS10-NUDT3A0A1W2PQS6 291 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 C17orf102A2RUQ5 167 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 OR6C68A6NDL8 312 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 C17orf100A8MU93 164 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 SPTLC2O15270 562 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 RNMTO43148 476 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 ANP32CO43423 234 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 KIF1CO43896 1103 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 DHX16O60231 1041 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 HBP1O60381 514 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 UNGP13051 313 aaPredicted RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 HSD3B1P14060 373 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 HOXB2P14652 356 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 CDC25AP30304 524 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 MTNR1AP48039 350 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 KCNJ4P48050 445 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 CLCNKBP51801 687 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 PGGT1BP53609 377 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 FHL1Q13642 323 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 PKP1Q13835 747 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 DHX8Q14562 1220 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 IL13RA2Q14627 380 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 ZRSR2Q15696 482 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 AP5B1Q2VPB7 878 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 ODF3L2Q3SX64 289 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 INO80DQ53TQ3 878 aaPredicted RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 ZNF549Q6P9A3 640 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 C9orf47Q6ZRZ4 202 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 WDR5BQ86VZ2 330 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 ZDHHC23Q8IYP9 409 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 LRRC57Q8N9N7 239 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 C7orf57Q8NEG2 295 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 GABPB2Q8TAK5 448 aaPredicted RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 BICD2Q8TD16 824 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 MORC4Q8TE76 937 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 SH3KBP1Q96B97 665 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 SCLT1Q96NL6 688 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 PSMD1Q99460 953 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 WDR77Q9BQA1 342 aaPredicted RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 WACQ9BTA9 647 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 NPLQ9BXD5 320 aaPredicted RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 CTDSP1Q9GZU7 261 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 RBM38Q9H0Z9 239 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 TLR8Q9NR97 1041 aaKnown RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 PLEKHB1Q9UF11 243 aaPredicted RBP3.09□□□□□ -1.91
RIF1-212ENST00000498041 FBXO40Q9UH90 709 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 CDH22Q9UJ99 828 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 BCORL1Q5H9F3 1711 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 MYO5CQ9NQX4 1742 aa3.09□□□□□ -1.91
RIF1-212ENST00000498041 MYO5BQ9ULV0 1848 aa3.09□□□□□ -1.92
RIF1-212ENST00000498041 NCOA1Q15788 1441 aa3.09□□□□□ -1.92
RIF1-212ENST00000498041 AKNAQ7Z591 1439 aa3.09□□□□□ -1.92
RIF1-212ENST00000498041 SCAPERQ9BY12 1400 aa3.09□□□□□ -1.92
RIF1-212ENST00000498041 YEATS2Q9ULM3 1422 aa3.09□□□□□ -1.92
RIF1-212ENST00000498041 EVPLQ92817 2033 aa3.09□□□□□ -1.92
RIF1-212ENST00000498041 PREX2Q70Z35 1606 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 ADGBQ8N7X0 1667 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 CEP152O94986 1710 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 KIDINS220Q9ULH0 1771 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 STMND1H3BQB6 276 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 TPD52L2O43399 206 aaKnown RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 TSPAN3O60637 253 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 EIF3JO75822 258 aaKnown RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 CBX6O95503 412 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 CYP1A2P05177 515 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 MYZAPP0CAP1 466 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 HSPA5P11021 654 aaKnown RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 CPA1P15085 419 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 ARSBP15848 533 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 CHRNB2P17787 502 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 HNF1BP35680 557 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 CCT5P48643 541 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 ENTPD1P49961 510 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 SLC12A1Q13621 1099 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 SYTL3Q4VX76 610 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 SH2D4BQ5SQS7 431 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 HEPHL1Q6MZM0 1159 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 GJB7Q6PEY0 223 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 CTU1Q7Z7A3 348 aaKnown RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 SERPINA11Q86U17 422 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms