RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 DNAJB1P25685 340 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RDXP35241 583 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 BMPR1AP36894 532 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CDKN2BP42772 138 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ALDH1A3P47895 512 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ATP5OP48047 213 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 VSNL1P62760 191 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RPL10AP62906 217 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 DR1Q01658 176 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 DSG1Q02413 1049 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 HLTFQ14527 1009 aaKnown RBP eCLIP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 PPP1R7Q15435 360 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SLC25A52Q3SY17 297 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RAB41Q5JT25 222 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 C10orf120Q5SQS8 335 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SYCP2LQ5T4T6 812 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ERMARDQ5T6L9 678 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 OTUD1Q5VV17 481 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RWDD4Q6NW29 188 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CCDC137Q6PK04 289 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 VSTM1Q6UX27 236 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 DENND5BQ6ZUT9 1274 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 BHLHA9Q7RTU4 235 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ZC3H18Q86VM9 953 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CCDC105Q8IYK2 499 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RASGEF1CQ8N431 466 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 NIPA2Q8N8Q9 360 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 EXD1Q8NHP7 514 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SPPL2BQ8TCT7 592 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 DQX1Q8TE96 717 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 MZB1Q8WU39 189 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 POF1BQ8WVV4 589 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CASKIN2Q8WXE0 1202 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ARNTL2Q8WYA1 636 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CASP10Q92851 521 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RBM41Q96IZ5 413 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 C8orf48Q96LL4 319 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SLC2A13Q96QE2 648 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 NAP1L3Q99457 506 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 NPY6RQ99463 290 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 UBXN6Q9BZV1 441 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 DCLK3Q9C098 648 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 NKX2-4Q9H2Z4 354 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CCSER2Q9H7U1 834 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 PCDH18Q9HCL0 1135 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 CSNK1G1Q9HCP0 422 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ANLNQ9NQW6 1124 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 AP5S1Q9NUS5 200 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 OSER1Q9NX31 292 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SMPD4Q9NXE4 827 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 RNF14Q9UBS8 474 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SUCOQ9UBS9 1254 aaKnown RBP4.92□□□□□ -1.62
CMSS1-209ENST00000497345 LCMT1Q9UIC8 334 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 ZNF148Q9UQR1 794 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 SNX24Q9Y343 169 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 YIPF1Q9Y548 306 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 HEY1Q9Y5J3 304 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 BACE2Q9Y5Z0 518 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 HTTP42858 3142 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 MYO16Q9Y6X6 1858 aa4.92□□□□□ -1.62
CMSS1-209ENST00000497345 hCG_1818297A0A087WSY0 165 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 GOLGA6L7A0A1B0GV03 622 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 LINC01553A4QN01 128 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 C3orf70A6NLC5 250 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 FAM72CH0Y354 149 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 H0YGN5 161 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 SGK1O00141 431 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 EEF2KO00418 725 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 CES2O00748 559 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 TRDMT1O14717 391 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 APOL1O14791 398 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 TGM5O43548 720 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 PHF2O75151 1096 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 TJP3O95049 919 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 IFNB1P01574 187 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 ZSCAN5DPP0CG00 497 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 PECAM1P16284 738 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 GOT1P17174 413 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 L1CAMP32004 1257 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 GTF2F1P35269 517 aaKnown RBP eCLIP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 ADRA1BP35368 520 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 PCK1P35558 622 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 PPM1AP35813 382 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 COILP38432 576 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 MAGEA11P43364 429 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 PTPN9P43378 593 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 RPL34P49207 117 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 TUFMP49411 452 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 AFF3P51826 1226 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 GSCP56915 257 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 TBX4P57082 545 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 EIF3EP60228 445 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 FAM193AP78312 1265 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 HTRA4P83105 476 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 OTUD4Q01804 1114 aaKnown RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 GPM6BQ13491 265 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 DPYSL3Q14195 570 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 CBX2Q14781 532 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-209ENST00000497345 VEPH1Q14D04 833 aa4.91□□□□□ -1.62
CMSS1-209ENST00000497345 SIX1Q15475 284 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms