RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZNF543Q08ER8 600 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NAB1Q13506 487 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 KRR1Q13601 381 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 CCDC58Q4VC31 144 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 CCNJQ5T5M9 372 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 GTF2IRD2BQ6EKJ0 949 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ZNF598Q86UK7 904 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 GTF2IRD2Q86UP8 949 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ADGRF4Q8IZF3 695 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ASCC1Q8N9N2 400 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 LEMD2Q8NC56 503 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 TP53INP1Q96A56 240 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 RCN3Q96D15 328 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 MMP19Q99542 508 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NAA50Q9GZZ1 169 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 SARDHQ9UL12 918 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ST14Q9Y5Y6 855 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 TANC1Q9C0D5 1861 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 LOC285556D6RIA3 1793 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 B8ZZF3 427 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 HOXC11O43248 304 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 GSNP06396 782 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 BMP1P13497 986 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ENO3P13929 434 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 MATN1P21941 496 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 MAGEA6P43360 314 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 NAMPTP43490 491 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SERPINB10P48595 397 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 GDF10P55107 478 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PKNOX1P55347 436 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PSMC5P62195 406 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ECT2LQ008S8 904 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CAP1Q01518 475 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ILF2Q12905 390 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 SLC12A1Q13621 1099 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CBX2Q14781 532 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 PRR16Q569H4 304 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 N4BP2L1Q5TBK1 243 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 BROXQ5VW32 411 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CCSAPQ6IQ19 270 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 TMC5Q6UXY8 1006 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CATSPERGQ6ZRH7 1159 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SFRP1Q8N474 314 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 BEST2Q8NFU1 509 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SEMA4DQ92854 862 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 VPS33AQ96AX1 596 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 FBXL18Q96ME1 805 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 MTG1Q9BT17 334 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 CLPBQ9H078 707 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 UPF3AQ9H1J1 476 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 ST6GALNAC4Q9H4F1 302 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ATP13A3Q9H7F0 1226 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 POPDC2Q9HBU9 364 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ANKHQ9HCJ1 492 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 TBC1D22BQ9NU19 505 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 HSPBP1Q9NZL4 362 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 EMCNQ9ULC0 261 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 RAD54BQ9Y620 910 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 MYH9P35579 1960 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 CASP8AP2Q9UKL3 1982 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CXorf49A8MYA2 514 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CFLARO15519 480 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PPP1R11O60927 126 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 RFPL2O75678 378 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 VAPBO95292 243 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 PKLRP30613 574 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 SERPINB5P36952 375 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 LBX1P52954 281 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ATN1P54259 1190 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 NOMO3P69849 1222 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CDONQ4KMG0 1287 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ATP13A4Q4VNC1 1196 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 TMTC4Q5T4D3 741 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 HMBOX1Q6NT76 420 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ZCCHC7Q8N3Z6 543 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 AFAP1L2Q8N4X5 818 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 MCUQ8NE86 351 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 LENG9Q96B70 501 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 C12orf42Q96LP6 360 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 CLSTN3Q9BQT9 956 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ARHGAP39Q9C0H5 1083 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 TRIT1Q9H3H1 467 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 BCAS3Q9H6U6 928 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 TOPORSQ9NS56 1045 aaPredicted RBP9.18□□□□□ -0.94
HPS4-217ENST00000496385 HOXC10Q9NYD6 342 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 STMN3Q9NZ72 180 aa9.18□□□□□ -0.94
HPS4-217ENST00000496385 ZSWIM8A7E2V4 1837 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms