RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CATSPERBQ9H7T0 1116 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 GDF3Q9NR23 364 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 NDFIP2Q9NV92 336 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 DNAI1Q9UI46 699 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 FZD10Q9ULW2 581 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 NEUROG3Q9Y4Z2 214 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 SCINQ9Y6U3 715 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 WASF2Q9Y6W5 498 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 A0A1B0GTQ1 180 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 A0A1W2PQJ5 194 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 H0Y8X5 98 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-213ENST00000496347 MAGEC1O60732 1142 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 LEFTY1O75610 366 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 GSRP00390 522 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 FTH1P19P0C7X4 201 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 MYBL1P10243 752 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 PSMA2P25787 234 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 CCNHP51946 323 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-213ENST00000496347 NEK3P51956 506 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 FAM193AP78312 1265 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 OGDHQ02218 1023 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 PARP15Q460N3 678 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 CARD16Q5EG05 197 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 SCYL2Q6P3W7 929 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ZNF571Q7Z3V5 609 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ZSCAN30Q86W11 494 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 MFSD2AQ8NA29 543 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 CASKIN2Q8WXE0 1202 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ARRDC3Q96B67 414 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 LRIG1Q96JA1 1093 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ELF4Q99607 663 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ERVMER34-1Q9H9K5 563 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 ARHGAP20Q9P2F6 1191 aa16.02■□□□□ 0.16
HDAC4-213ENST00000496347 APOBEC2Q9Y235 224 aaKnown RBP16.02■□□□□ 0.16
HDAC4-213ENST00000496347 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.16
HDAC4-213ENST00000496347 DMXL2Q8TDJ6 3036 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 WASH4PA8MWX3 477 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 PRAMEF26H0Y7S4 382 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 RNGTTO60942 597 aaKnown RBP16.01■□□□□ 0.15
HDAC4-213ENST00000496347 CD160O95971 181 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 WNT1P04628 370 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 ARRB1P49407 418 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-213ENST00000496347 NXPH1P58417 271 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 YBEYP58557 167 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-213ENST00000496347 FANCCQ00597 558 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 ARSIQ5FYB1 569 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 RAB44Q7Z6P3 723 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-213ENST00000496347 HORMAD1Q86X24 394 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 PYROXD2Q8N2H3 581 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 TMEM145Q8NBT3 493 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 SYN2Q92777 582 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-213ENST00000496347 HEPHQ9BQS7 1158 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 SCNM1Q9BWG6 230 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 OSBPL1AQ9BXW6 950 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 TM6SF2Q9BZW4 377 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 BZW2Q9Y6E2 419 aaKnown RBP16.01■□□□□ 0.15
HDAC4-213ENST00000496347 CFAP47Q6ZTR5 3102 aa16.01■□□□□ 0.15
HDAC4-213ENST00000496347 PKD1L2Q7Z442 2459 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 TLR4O00206 839 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 DDX3XO00571 662 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC4-213ENST00000496347 KDELR3O43731 214 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 HYAL3O43820 417 aaPredicted RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 CREB3O43889 395 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 FTLP02792 175 aaPredicted RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 ADRB3P13945 408 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 MAT2AP31153 395 aaKnown RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 PBX1P40424 430 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 DNA2P51530 1060 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 TPI1P60174 286 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 ST3GAL2Q16842 350 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 KIAA1161Q6NSJ0 714 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 UNQ6494/PRO21346Q6UXR6 183 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 VPS36Q86VN1 386 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 PSTKQ8IV42 348 aaKnown RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 UMODL1-AS1Q8N2C9 162 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 OR2AP1Q8NGE2 309 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 ADAMTS14Q8WXS8 1223 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 ZNF653Q96CK0 615 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 GDAP1L1Q96MZ0 367 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 NOL6Q9H6R4 1146 aaKnown RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 MRPL47Q9HD33 250 aaKnown RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 HECAQ9UBI9 543 aaPredicted RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 CNOT8Q9UFF9 292 aaKnown RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 AP4E1Q9UPM8 1137 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 ARID1BQ8NFD5 2236 aaPredicted RBP16■□□□□ 0.15
HDAC4-213ENST00000496347 PTPRBP23467 1997 aa16■□□□□ 0.15
HDAC4-213ENST00000496347 CHD6Q8TD26 2715 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 A0A1W2PQU0 124 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 TMEM8BA6NDV4 472 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 TMEM191CA6NGB0 347 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 WNT9AO14904 365 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 AP1G1O43747 822 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 TMCC1O94876 653 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms