RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 LPAL2Q16609 132 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 DPY19L3Q6ZPD9 716 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 ARHGAP36Q6ZRI8 547 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 USP30Q70CQ3 517 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 LPCAT2Q7L5N7 544 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 NT5DC3Q86UY8 548 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 FAM124AQ86V42 546 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 FAM160A2Q8N612 972 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 PQLC3Q8N755 202 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 CCNYQ8ND76 341 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 OR2AP1Q8NGE2 309 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 PIP4K2CQ8TBX8 421 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 KRT35Q92764 455 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 TOE1Q96GM8 510 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 PPP1R16AQ96I34 528 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 BTBD1Q9H0C5 482 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 ZDHHC6Q9H6R6 413 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 PDFQ9HBH1 243 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 USP36Q9P275 1121 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 CAPN6Q9Y6Q1 641 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 CACNA1HO95180 2353 aa12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 NYNRINQ9P2P1 1898 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-213ENST00000495232 A0A1W2PP55 124 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 KRIT1O00522 736 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 MAFKO60675 156 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 CST8O60676 142 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 ZNF821O75541 412 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 LEFTY1O75610 366 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 RNASEH2AO75792 299 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 MAP3K6O95382 1288 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 POP4O95707 220 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 KRT10P13645 584 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 GARSP41250 739 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 CDKN2BP42772 138 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 MARCKSL1P49006 195 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 RENBPP51606 427 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 GBE1Q04446 702 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 GALNT2Q10471 571 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 GRM3Q14832 879 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 LLGL1Q15334 1064 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 CYTH1Q15438 398 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 MARC1Q5VT66 337 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 SLC9A4Q6AI14 798 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 TP53INP2Q8IXH6 220 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 CHST14Q8NCH0 376 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 TMIEQ8NEW7 156 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 TRIM58Q8NG06 486 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 LRIG1Q96JA1 1093 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 ZC3H10Q96K80 434 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 HINFPQ9BQA5 517 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 SGK2Q9HBY8 427 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 SEPT3Q9UH03 358 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 PPM1HQ9ULR3 514 aa12.28□□□□□ -0.44
CSNK1E-213ENST00000495232 USP34Q70CQ2 3546 aa12.27□□□□□ -0.44
CSNK1E-213ENST00000495232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 IGLV3-19P01714 112 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 BCKDHBP21953 392 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 TGM2P21980 687 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 CCNCP24863 283 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 HSPA9P38646 679 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 NR2C2P49116 596 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 DHPSP49366 369 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 PDK1Q15118 436 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 PPP2R5EQ16537 467 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 MYLK3Q32MK0 819 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 POM121L1PQ3SYA9 428 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 PLK5Q496M5 336 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 SPDYCQ5MJ68 293 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 CFAP58Q5T655 872 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 LAIR1Q6GTX8 287 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 PAF1Q8N7H5 531 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 PLD5Q8N7P1 536 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 OR6K2Q8NGY2 324 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 P3H4Q92791 437 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 EXOC2Q96KP1 924 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 GPR174Q9BXC1 333 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms