RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	GDAP2	Q9NXN4	497 aa		13.62	□□□□□ -0.23
SUPT20H-222	ENST00000495071	UBAP1	Q9NZ09	502 aa		13.62	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NCKIPSD	Q9NZQ3	722 aa		13.62	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RAB26	Q9ULW5	256 aa		13.62	□□□□□ -0.23
SUPT20H-222	ENST00000495071	COPG1	Q9Y678	874 aa	Known RBP	13.62	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DLX3	O60479	287 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	STAMBP	O95630	424 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AHSG	P02765	367 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PRKAA2	P54646	552 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RPL26	P61254	145 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	LAYN	Q6UX15	382 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	GK5	Q6ZS86	529 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	LINC00523	Q86TU6	105 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	GPC2	Q8N158	579 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	HAPLN3	Q96S86	360 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	UBE2O	Q9C0C9	1292 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ZNF189	O75820	626 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CSPG5	O95196	566 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RANBP1	P43487	201 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	GK3P	Q14409	553 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	MAP7D1	Q3KQU3	841 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NADK2	Q4G0N4	442 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TWF2	Q6IBS0	349 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AFAP1L2	Q8N4X5	818 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DNAJB3	Q8WWF6	145 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NCSTN	Q92542	709 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DLG3	Q92796	817 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DNAJC1	Q96KC8	554 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TEKT5	Q96M29	485 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ATXN3L	Q9H3M9	355 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ZBTB26	Q9HCK0	441 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ANLN	Q9NQW6	1124 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CACNG4	Q9UBN1	327 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TRPC5OS	A6NMA1	111 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KCNU1	A8MYU2	1149 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DENR	O43583	198 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PMPCB	O75439	489 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DDN	O94850	711 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	MT-CYB	P00156	380 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SLC35E2B	P0CK96	405 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RPL34	P49207	117 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RAB10	P61026	200 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PPHLN1	Q8NEY8	458 aa	Known RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CEP70	Q8NHQ1	597 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	EZH1	Q92800	747 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	VAT1	Q99536	393 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	FICD	Q9BVA6	458 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	FSD1L	Q9BXM9	530 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	FTHL17	Q9BXU8	183 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	BRD8	Q9H0E9	1235 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ADAMTS10	Q9H324	1103 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	POMK	Q9H5K3	350 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	FBXW11	Q9UKB1	542 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PCDHGB4	Q9UN71	923 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PCDHGB5	Q9Y5G0	923 aa		13.61	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NEMP2	A6NFY4	417 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	MT-CO1	P00395	513 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DARS	P14868	501 aa	Known RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	FGFR3	P22607	806 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	HK2	P52789	917 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CSHL1	Q14406	222 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	GPRC5A	Q8NFJ5	357 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	STYX	Q8WUJ0	223 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	HDAC11	Q96DB2	347 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ZFR	Q96KR1	1074 aa	Known RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	COLEC11	Q9BWP8	271 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TRPC7	Q9HCX4	862 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CCDC167	Q9P0B6	97 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NRCAM	Q92823	1304 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RRN3P2	A6NIE6	340 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AP3B1	O00203	1094 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	LRIG2	O94898	1065 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PSMC3	P17980	439 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	HSPA13	P48723	471 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PLK1	P53350	603 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KCTD11	Q693B1	232 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ZNF470	Q6ECI4	717 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ESRP1	Q6NXG1	681 aa	Known RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	B3GNT6	Q6ZMB0	384 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	LILRA2	Q8N149	483 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TRIML2	Q8N7C3	387 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NT5C3B	Q969T7	300 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ATP6V1E2	Q96A05	226 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SLC2A13	Q96QE2	648 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SLC9A7	Q96T83	725 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	MRPL46	Q9H2W6	279 aa	Known RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DYNC1LI2	O43237	492 aa	Predicted RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	MMP3	P08254	477 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SMIM18	P0DKX4	95 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KPNA2	P52292	529 aa	Known RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DAOA	P59103	153 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PSME3	P61289	254 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	COG7	P83436	770 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AGK	Q53H12	422 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PCID2	Q5JVF3	399 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KRT80	Q6KB66	452 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ATPAF2	Q8N5M1	289 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	MRPS26	Q9BYN8	205 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms