RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 B3GNT4Q9C0J1 378 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 SEMA6CQ9H3T2 930 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 GPN2Q9H9Y4 310 aaPredicted RBP6.97□□□□□ -1.29
FN1-225ENST00000494446 AGPAT3Q9NRZ7 376 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 ABCC13Q9NSE7 274 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 STK17AQ9UEE5 414 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 CCDC39Q9UFE4 941 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 SLC25A13Q9UJS0 675 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 ITGB1BP2Q9UKP3 347 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 GPR34Q9UPC5 381 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 AKAP9Q99996 3911 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 CSMD2Q7Z408 3487 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 ABCA2Q9BZC7 2435 aa6.97□□□□□ -1.29
FN1-225ENST00000494446 MDC1Q14676 2089 aaKnown RBP6.96□□□□□ -1.29
FN1-225ENST00000494446 LRRIQ3A6PVS8 624 aaPredicted RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 YJEFN3A6XGL0 299 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 E7ENQ6 273 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 M0QYT0 321 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 SPTLC2O15270 562 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 HNRNPRO43390 633 aaKnown RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 RAD1O60671 282 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 CTSLP07711 333 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 RECQLP46063 649 aaPredicted RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 ARSDP51689 593 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 AP3M2P53677 418 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 SLC8A3P57103 927 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 ANAPC15P60006 121 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 RPS21P63220 83 aaKnown RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 NUCB2P80303 420 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 SULT2A1Q06520 285 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 INCA1Q0VD86 236 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 SGCGQ13326 291 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 PTK2BQ14289 1009 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 MS4A13Q5J8X5 152 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 ATP1A1-AS1Q5TC04 95 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 TCTN3Q6NUS6 607 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 TIPARPQ7Z3E1 657 aaKnown RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 SLITRK4Q8IW52 837 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 CCDC65Q8IXS2 484 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 CCDC13Q8IYE1 715 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 LGI2Q8N0V4 545 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 PCDH19Q8TAB3 1148 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 ERCC4Q92889 916 aaPredicted RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 AZIN2Q96A70 460 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 KIAA1143Q96AT1 154 aaPredicted RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 FEM1CQ96JP0 617 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 HAPLN3Q96S86 360 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 SLC4A5Q9BY07 1137 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 UBXN6Q9BZV1 441 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 UNKQ9C0B0 810 aaKnown RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 DNAI2Q9GZS0 605 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 INTS2Q9H0H0 1204 aaKnown RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 NUCKS1Q9H1E3 243 aaKnown RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 LRRC4Q9HBW1 653 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 ERRFI1Q9UJM3 462 aaPredicted RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 PNMA8BQ9ULN7 279 aaPredicted RBP6.96□□□□□ -1.3
FN1-225ENST00000494446 LIMCH1Q9UPQ0 1083 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 NAALADL1Q9UQQ1 740 aa6.96□□□□□ -1.3
FN1-225ENST00000494446 LOC101059948A0A1B0GTJ6 334 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 FRMD3A2A2Y4 597 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 TCP11X1B4DZS4 312 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 RNF103O00237 685 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 TULP2O00295 520 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 TGFB1I1O43294 461 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 ATP9BO43861 1147 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 EXOC3O60645 756 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 CD2BP2O95400 341 aaKnown RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 MOCS2O96007 188 aaPredicted RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 ASS1P00966 412 aaKnown RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 IGLV3-27P01718 113 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 RPN1P04843 607 aaKnown RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 FGF3P11487 239 aaPredicted RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 CTSEP14091 401 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 TCN2P20062 427 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 GJB2P29033 226 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 CHRNA3P32297 505 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 PIK3CAP42336 1068 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 COPB1P53618 953 aaKnown RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 PPARDQ03181 441 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 ADIGQ0VDE8 80 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 SLC12A1Q13621 1099 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 ELOCQ15369 112 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 ARHGAP44Q17R89 818 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 MAP9Q49MG5 647 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 KIAA1161Q6NSJ0 714 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 ERN2Q76MJ5 926 aaKnown RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 PIM3Q86V86 326 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 MCEMP1Q8IX19 187 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 TP53INP2Q8IXH6 220 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 NELFCDQ8IXH7 590 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 UNC5BQ8IZJ1 945 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 FSTL5Q8N475 847 aaPredicted RBP6.95□□□□□ -1.3
FN1-225ENST00000494446 TTC13Q8NBP0 860 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 RCBTB1Q8NDN9 531 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 OR6C4Q8NGE1 309 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 PARD3BQ8TEW8 1205 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 TAF4BQ92750 862 aa6.95□□□□□ -1.3
FN1-225ENST00000494446 ART4Q93070 314 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms