RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 HNRNPDQ14103 355 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 IQCB1Q15051 598 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ARL13BQ3SXY8 428 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 CCDC157Q569K6 752 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 CARD16Q5EG05 197 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 SEL1L3Q68CR1 1132 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 DNAJC24Q6P3W2 148 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 SCYL2Q6P3W7 929 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ZNF783Q6ZMS7 281 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 GLRX5Q86SX6 157 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 PRPF39Q86UA1 669 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 MCOLN2Q8IZK6 566 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 C3orf20Q8ND61 904 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ADAMTS14Q8WXS8 1223 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ARHGEF2Q92974 986 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 MCEEQ96PE7 176 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ELF4Q99607 663 aaPredicted RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 BPIFA3Q9BQP9 254 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 TM6SF2Q9BZW4 377 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 NOL6Q9H6R4 1146 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 FZD3Q9NPG1 666 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 TMEM248Q9NWD8 314 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 IL36AQ9UHA7 158 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ZMIZ1Q9ULJ6 1067 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ZFR2Q9UPR6 939 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 MSRB2Q9Y3D2 182 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 WASF2Q9Y6W5 498 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ZFHX4Q86UP3 3567 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 CFAP47Q6ZTR5 3102 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 IGF2RP11717 2491 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 DDX3XO00571 662 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 PCDHGA12O60330 932 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 PRNPP04156 253 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 SKILP12757 684 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ZNF165P49910 485 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 CCNHP51946 323 aaPredicted RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ZNF143P52747 638 aaPredicted RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 CLDN6P56747 220 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 CLDN2P57739 230 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 SLC20A2Q08357 652 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 FGL2Q14314 439 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 SUZ12Q15022 739 aaKnown RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ZNF284Q2VY69 593 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ATXN7L2Q5T6C5 722 aaPredicted RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ACBD5Q5T8D3 534 aaPredicted RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 NAPEPLDQ6IQ20 393 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 RETSATQ6NUM9 610 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 KDM7AQ6ZMT4 941 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ERN2Q76MJ5 926 aaKnown RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ZNF571Q7Z3V5 609 aaPredicted RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 SLFN11Q7Z7L1 901 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 TRIM69Q86WT6 500 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ARFGAP1Q8N6T3 406 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 MFSD2AQ8NA29 543 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 TMIEQ8NEW7 156 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 SAP25Q8TEE9 199 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 NTAN1Q96AB6 310 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 TRIM7Q9C029 511 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 HAUS4Q9H6D7 363 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 PREBQ9HCU5 417 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 GDF3Q9NR23 364 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 TMEM51Q9NW97 253 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 RALYQ9UKM9 306 aaKnown RBP8.7□□□□□ -1.02
LRCH3-219ENST00000494069 FZD10Q9ULW2 581 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
LRCH3-219ENST00000494069 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 SYCE3A1L190 88 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 FAM149AA5PLN7 773 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 FAM221BA6H8Z2 402 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 SMTNL1A8MU46 457 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 PRAMEF26H0Y7S4 382 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 TAF4O00268 1085 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 RAD51BO15315 384 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 KDELR3O43731 214 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 CREB3O43889 395 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 RAMP2O60895 175 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 SDC3O75056 442 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 DKK1O94907 266 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 PCDH8O95206 1070 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 TRIM16O95361 564 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 CAPNS1P04632 268 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 ITGAVP06756 1048 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 ITIH2P19823 946 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 EPHB2P29323 1055 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 L1CAMP32004 1257 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 ABL2P42684 1182 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 GRK6P43250 576 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 RECQLP46063 649 aaPredicted RBP8.69□□□□□ -1.02
LRCH3-219ENST00000494069 MAPKAPK2P49137 400 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 SCAPQ12770 1279 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 MAMLD1Q13495 774 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 STAT4Q14765 748 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 NR1I3Q14994 352 aa8.69□□□□□ -1.02
LRCH3-219ENST00000494069 POLD3Q15054 466 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms