RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PDGFAP04085 211 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 C8BP07358 591 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NPR1P16066 1061 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 KCNA5P22460 613 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CBLP22681 906 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 STAT1P42224 750 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 MFAP3P55082 362 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 OR2B6P58173 313 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 POLD3Q15054 466 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CHI3L2Q15782 390 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NFIL3Q16649 462 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 FUT11Q495W5 492 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GPATCH4Q5T3I0 446 aaKnown RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 DPY19L3Q6ZPD9 716 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ERMP1Q7Z2K6 904 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 SYTL1Q8IYJ3 562 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 SNX31Q8N9S9 440 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 AFG1LQ8WV93 481 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GLT1D1Q96MS3 346 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 C12orf57Q99622 126 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NPLQ9BXD5 320 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 KMT5AQ9NQR1 393 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 PKD2L1Q9P0L9 805 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 KLHL20Q9Y2M5 609 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 PCDHGB3Q9Y5G1 929 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GOLGA8SH3BPF8 625 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 COPEO14579 308 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 YES1P07947 543 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 RETP07949 1114 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 AKR1B1P15121 316 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 KELP23276 732 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF76P36508 570 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GRIA3P42263 894 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 HCAR3P49019 387 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 PRIM2P49643 509 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ADCY7P51828 1080 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GPX6P59796 221 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 PCDH1Q08174 1060 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ECM1Q16610 540 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 FAM26DQ5JW98 314 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CACHD1Q5VU97 1274 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 PM20D1Q6GTS8 502 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CRTC3Q6UUV7 619 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CFAP77Q6ZQR2 320 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 SLC13A5Q86YT5 568 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ARHGEF19Q8IW93 802 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TOE1Q96GM8 510 aaKnown RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 MAGED4Q96JG8 741 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CDRT15Q96T59 188 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 MLPHQ9BV36 600 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 C1orf21Q9H246 121 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NANOGQ9H9S0 305 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 FBXO28Q9NVF7 368 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC59Q9P031 241 aaKnown RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TMEM9Q9P0T7 183 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 MYO3BQ8WXR4 1341 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 E7ENX8 843 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TM9SF1O15321 606 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 KLRC4O43908 158 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TCEA3O75764 348 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TGDSO95455 350 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 SERPINA6P08185 405 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM49P0CI25 452 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM49CP0CI26 452 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 DCKP27707 260 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NPY2RP49146 381 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CLK2P49760 499 aaKnown RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GDI2P50395 445 aaKnown RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 DEFA1P59665 94 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 DEFA3P59666 94 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ERVK-8P63133 956 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GALEQ14376 348 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TBRG1Q3YBR2 411 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 KIAA1841Q6NSI8 718 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF438Q7Z4V0 828 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 OR2T3Q8NH03 318 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 RAB2BQ8WUD1 216 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 IPCEF1Q8WWN9 437 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 LPGAT1Q92604 370 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 PROX1Q92786 737 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NXPE3Q969Y0 559 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 E2F7Q96AV8 911 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 EBF4Q9BQW3 602 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ING2Q9H160 280 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM45Q9H8W5 580 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-205ENST00000493587 GLTPQ9NZD2 209 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 LRP2BPQ9P2M1 347 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TNFRSF10DQ9UBN6 386 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ENPP5Q9UJA9 477 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 NUDT5Q9UKK9 219 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 AP4E1Q9UPM8 1137 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC182A6NF36 153 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms