RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 KPNA3O00505 521 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 PLRG1O43660 514 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 PRAMEF11O60813 436 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 LEFTY1O75610 366 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 TMCC1O94876 653 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 IPO7O95373 1038 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 IGSF6O95976 241 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CFIP05156 583 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 ITGB7P26010 798 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 MAGEA1P43355 309 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 ID4P47928 161 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 DNA2P51530 1060 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CCR5P51681 352 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 HADHBP55084 474 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CDH6P55285 790 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 IL10RBQ08334 325 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CNTN1Q12860 1018 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 PDK2Q15119 407 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 SPA17Q15506 151 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 RSPO4Q2I0M5 234 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 AGBL4Q5VU57 503 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 NCEH1Q6PIU2 408 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 TMCO3Q6UWJ1 677 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 MAP7D3Q8IWC1 876 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 ARHGAP12Q8IWW6 846 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 ZCCHC9Q8N567 271 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 NPWQ8N729 165 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CHST14Q8NCH0 376 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 OR14C36Q8NHC7 312 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 SNX19Q92543 992 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 BIRC7Q96CA5 298 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CELF6Q96J87 481 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 RTKNQ9BST9 563 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 OSBPL1AQ9BXW6 950 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 HDAC8Q9BY41 377 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 TM6SF2Q9BZW4 377 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 SLC39A8Q9C0K1 460 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 MIR1-1HGQ9H1L0 117 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 SP110Q9HB58 689 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 PDFQ9HBH1 243 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 CAPN10Q9HC96 672 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 DLL3Q9NYJ7 618 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 HECAQ9UBI9 543 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 UBA2Q9UBT2 640 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 ACTL7AQ9Y615 435 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 WASF2Q9Y6W5 498 aa10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 PTPRZ1P23471 2315 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-206ENST00000492796 PLXNA2O75051 1894 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 A0A0A6YYK5 440 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 FAM47DPA6NHR8 397 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 TMEM110-MUSTN1A8MSY1 372 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 DFFAO00273 331 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC30A4O14863 429 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 BCAT2O15382 392 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 GDF9O60383 454 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 FSBPO95073 299 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 NDUFA10O95299 355 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 POP4O95707 220 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 IGHV4-34P06331 123 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 SYPP08247 313 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 AMPD1P23109 780 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 CD27P26842 260 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 GJC1P36383 396 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 NUDT1P36639 197 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC1A1P43005 524 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 PAPOLAP51003 745 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 ARSEP51690 589 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 METAP1P53582 386 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 RHOAP61586 193 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 IRX4P78413 519 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 RAD51Q06609 339 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 PUM1Q14671 1186 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 MESDQ14696 234 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 RFTN1Q14699 578 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 PIP5KL1Q5T9C9 394 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 ERN2Q76MJ5 926 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 VSIG1Q86XK7 387 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 ARRDC3Q96B67 414 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 RMDN1Q96DB5 314 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 CALR3Q96L12 384 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF599Q96NL3 588 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZDHHC6Q9H6R6 413 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 PREBQ9HCU5 417 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 TMEM9BQ9NQ34 198 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 EIF2B4Q9UI10 523 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 MFHAS1Q9Y4C4 1052 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 PCDHA13Q9Y5I0 950 aa10.83□□□□□ -0.68
CDC42SE1-206ENST00000492796 SDK1Q7Z5N4 2213 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 NUMA1Q14980 2115 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 SPTBN4Q9H254 2564 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 FRYLO94915 3013 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3DA0A087WVF3 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3IA0A087WXS9 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3EA0A087X179 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3KA0A087X1G2 549 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms