RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 RRN3Q9NYV6 651 aa11.24□□□□□ -0.61
SND1-215ENST00000492772 IPO11Q9UI26 975 aaKnown RBP11.24□□□□□ -0.61
SND1-215ENST00000492772 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
SND1-215ENST00000492772 PAXBP1Q9Y5B6 917 aa11.24□□□□□ -0.61
SND1-215ENST00000492772 UBR5O95071 2799 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 CCDC187A0A096LP49 1063 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 BICDL2A1A5D9 508 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 POM121BA6NF01 834 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 K7ERQ8 282 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 M0QYT0 321 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 SMAD6O43541 496 aaKnown RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 GRAP2O75791 330 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 CNTN5O94779 1100 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 GNA14O95837 355 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 ITGA2BP08514 1039 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 JUNDP17535 347 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 SNX16P57768 344 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 CLN3Q13286 438 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 PDE1CQ14123 709 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 DEFB133Q30KQ1 61 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 BRMS1LQ5PSV4 323 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 RETSATQ6NUM9 610 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 LINGO4Q6UY18 593 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 DPY19L3Q6ZPD9 716 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 C11orf57Q6ZUT1 292 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 FAM183BPQ6ZVS7 135 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 SLC26A9Q7LBE3 791 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 C14orf80Q86SX3 495 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 PCDH20Q8N6Y1 951 aaKnown RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 LMX1AQ8TE12 382 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 FEM1CQ96JP0 617 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 TBATAQ96M53 351 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 LENG8Q96PV6 779 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 CPXM1Q96SM3 734 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 BOCQ9BWV1 1114 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 SIK2Q9H0K1 926 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 TNKS2Q9H2K2 1166 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 CAAP1Q9H8G2 361 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 UBE2TQ9NPD8 197 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 TMEM51Q9NW97 253 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 ARHGEF38Q9NXL2 777 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 SPASTQ9UBP0 616 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 FADS3Q9Y5Q0 445 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 HEMK1Q9Y5R4 338 aaPredicted RBP11.23□□□□□ -0.61
SND1-215ENST00000492772 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
SND1-215ENST00000492772 MUSKO15146 869 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 RAD51BO15315 384 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 TSPAN6O43657 245 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 TNFSF15O95150 251 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ADCY5O95622 1261 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 SPTA1P02549 2419 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 L1CAMP32004 1257 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 NOS2P35228 1153 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 SERPINH1P50454 418 aaKnown RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 CSRP3P50461 194 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 MARSP56192 900 aaKnown RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 SGCGQ13326 291 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 SPIDRQ14159 915 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 FGL2Q14314 439 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ALFQ53S48 1182 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 C6orf132Q5T0Z8 1188 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 TTI2Q6NXR4 508 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 FOXR1Q6PIV2 292 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 LRRC31Q6UY01 552 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ZNF783Q6ZMS7 281 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 PRICKLE2Q7Z3G6 844 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ZNF397Q8NF99 534 aaPredicted RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 ASB12Q8WXK4 309 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 RAB7BQ96AH8 199 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 LIN37Q96GY3 246 aaPredicted RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 HEPHQ9BQS7 1158 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 FAM117AQ9C073 453 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 TKTL2Q9H0I9 626 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 ACP6Q9NPH0 428 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 PIGVQ9NUD9 493 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 APOBEC3BQ9UH17 382 aaKnown RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 ATXN7L1Q9ULK2 861 aaPredicted RBP11.22□□□□□ -0.61
SND1-215ENST00000492772 STAP1Q9ULZ2 295 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
SND1-215ENST00000492772 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
SND1-215ENST00000492772 DOCK4Q8N1I0 1966 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 A0A0D9SEW6 157 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 ILVBLA1L0T0 632 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 GOLGA6L4A6NEF3 574 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 DRGXA6NNA5 263 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 CYSRT1A8MQ03 144 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PYCARD-AS1I3L0S3 204 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 RNF103O00237 685 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 PAK4O96013 591 aaPredicted RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
SND1-215ENST00000492772 OR1E1P30953 314 aa11.21□□□□□ -0.61
SND1-215ENST00000492772 CXCR3P49682 368 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms