RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZBTB48P10074 688 aaPredicted RBP11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 TPSB2P20231 275 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 NAMPTP43490 491 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 YAP1P46937 504 aaKnown RBP11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 PHC1P78364 1004 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 HERC3Q15034 1050 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 TPSAB1Q15661 275 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 ATP6AP1LQ52LC2 224 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 EFL1Q7Z2Z2 1120 aaKnown RBP11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 DNAJB14Q8TBM8 379 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 STARD8Q92502 1023 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 TMEM176AQ96HP8 235 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 IFT80Q9P2H3 777 aaPredicted RBP11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 IPPQ9Y573 584 aa11.43□□□□□ -0.58
CRNKL1-204ENST00000490910 NR3C2P08235 984 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 HNRNPLP14866 589 aaKnown RBP eCLIP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TPH1P17752 444 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 GNL1P36915 607 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 NDST2P52849 883 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ILF2Q12905 390 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FOXD4Q12950 439 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 PTPN20Q4JDL3 420 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SAPCD2Q86UD0 394 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 PARP8Q8N3A8 854 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 OR52K1Q8NGK4 314 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 DDX1Q92499 740 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 GLT1D1Q96MS3 346 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 POPDC2Q9HBU9 364 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 PPME1Q9Y570 386 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ATRNL1Q5VV63 1379 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ADGRA2Q96PE1 1338 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 KCNK1O00180 336 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 EI24O14681 340 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TADA2AO75478 443 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ITGB3P05106 788 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ATP5F1P24539 256 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 PSMB4P28070 264 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 RAB39AQ14964 217 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 EPGNQ6UW88 154 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM131BQ86XD5 332 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ZC3H7AQ8IWR0 971 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 VPS33AQ96AX1 596 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM167AQ96KS9 214 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TAAR1Q96RJ0 339 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 UGT2B28Q9BY64 529 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 YTHDF1Q9BYJ9 559 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 RNF38Q9H0F5 515 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ENTPD7Q9NQZ7 604 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SUCOQ9UBS9 1254 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 C3orf18Q9UK00 162 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TNS2Q63HR2 1409 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 AP1G1O43747 822 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TSC22D2O75157 780 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 DBTP11182 482 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 DNASE1L3Q13609 305 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 STXBP5Q5T5C0 1151 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 REP15Q6BDI9 236 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 CYP2U1Q7Z449 544 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SULF1Q8IWU6 871 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 PLD5Q8N7P1 536 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 HOPXQ9BPY8 73 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 ZNF358Q9NW07 568 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 GDAP2Q9NXN4 497 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FNDC3AQ9Y2H6 1198 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 WBP11Q9Y2W2 641 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM32AQ9Y421 112 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 HEMK1Q9Y5R4 338 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SNX9Q9Y5X1 595 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 GAKO14976 1311 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 UBA6A0AVT1 1052 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SAGE2PA6NJ88 616 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 HACD1B0YJ81 288 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 H0YJX3 145 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 KATNA1O75449 491 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 MICAL2O94851 1124 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FGF3P11487 239 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 PRKCHP24723 683 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 CD151P48509 253 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 CDH8P55286 799 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 RBP5P82980 135 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 DCAF6Q58WW2 860 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FAM196AQ6ZSG2 479 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 FIBCD1Q8N539 461 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 OR5B17Q8NGF7 314 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 TOP1MTQ969P6 601 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 HPDLQ96IR7 371 aa11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SNRNP25Q9BV90 132 aaKnown RBP11.42□□□□□ -0.58
CRNKL1-204ENST00000490910 SUPT3HB4E1H0 165 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 GABBR2O75899 941 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 CHRNGP07510 517 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 GK3PQ14409 553 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 PEX5LQ8IYB4 626 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 SAMD3Q8N6K7 520 aa11.41□□□□□ -0.58
CRNKL1-204ENST00000490910 METTL25Q8N6Q8 603 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms