RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 LENG8Q96PV6 779 aaPredicted RBP4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 SENP7Q9BQF6 1050 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 UQCC2Q9BRT2 126 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 GON7Q9BXV9 100 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF717Q9BY31 904 aaPredicted RBP4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 MRPL9Q9BYD2 267 aaKnown RBP4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 TRPV6Q9H1D0 765 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 PDZD7Q9H5P4 517 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 MKNK2Q9HBH9 465 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 C8orf4Q9NR00 106 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 FBXO8Q9NRD0 319 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 COMMD8Q9NX08 183 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 PKD2L2Q9NZM6 624 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 KCND2Q9NZV8 630 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 HMGXB4Q9UGU5 601 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 ANAPC7Q9UJX3 599 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 VANGL2Q9ULK5 521 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 UGT2A1Q9Y4X1 527 aa4.84□□□□□ -1.64
SNRNP40-206ENST00000489853 C5P01031 1676 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CROCCQ5TZA2 2017 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MROH5Q6ZUA9 1318 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ANKRD36CQ5JPF3 1778 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CCDC195A0A1B0GUA6 201 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM221BA6H8Z2 402 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GOLGA8IPA6NC78 632 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 hCG_1984214I3L0E3 225 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 hCG_2039718K7EN88 272 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TRIM38O00635 465 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF195O14628 629 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TRDMT1O14717 391 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 AURKAO14965 403 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 BET1O15155 118 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TGFB1I1O43294 461 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 DCXO43602 365 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MARCH6O60337 910 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GAS7O60861 476 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ENTPD3O75355 529 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 DAB1O75553 588 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CCNKO75909 580 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TOMM70O94826 608 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 PROSCO94903 275 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ARHGEF15O94989 841 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 NADKO95544 446 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 EGFRP00533 1210 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GSTM1P09488 218 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MBL2P11226 248 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 BMP3P12645 472 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ETS1P14921 441 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ACPPP15309 386 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ATF7P17544 494 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 PRKACAP17612 351 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GAP43P17677 238 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 IMPDH1P20839 514 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CCNCP24863 283 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 RBL1P28749 1068 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CCND2P30279 289 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 HADHAP40939 763 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CTSOP43234 321 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GABRB2P47870 512 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 OR3A3P47888 321 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 NUDT2P50583 147 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ARSDP51689 593 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 DSTNP60981 165 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MRPS5P82675 430 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FMO1Q01740 532 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 RHDQ02161 417 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 RAD51Q06609 339 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 BST2Q10589 180 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 POU4F2Q12837 409 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MERTKQ12866 999 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TRAP1Q12931 704 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 BFSP1Q12934 665 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TARDBPQ13148 414 aaKnown RBP eCLIP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 KRR1Q13601 381 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC12A1Q13621 1099 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CCDC85BQ15834 202 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC36A3Q495N2 470 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CBWD6Q4V339 395 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SBK1Q52WX2 424 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FASTKD1Q53R41 847 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CBWD3Q5JTY5 395 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GNASQ5JWF2 1037 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CBWD5Q5RIA9 395 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 INTS11Q5TA45 600 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FAXCQ5TGI0 409 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 RSBN1Q5VWQ0 802 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 PEAR1Q5VY43 1037 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 KRT39Q6A163 491 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GTF2IRD2BQ6EKJ0 949 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ERAP2Q6P179 960 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 NSMFQ6X4W1 530 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ANKS3Q6ZW76 656 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CHSY3Q70JA7 882 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 OTOP3Q7RTS5 596 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 PRICKLE2Q7Z3G6 844 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 KCTD20Q7Z5Y7 419 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GALNT7Q86SF2 657 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GTF2IRD2Q86UP8 949 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 RHPN2Q8IUC4 686 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ZFPM1Q8IX07 1006 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms