RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TMCC1O94876 653 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 NDUFA10O95299 355 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 POP4O95707 220 aaKnown RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 SERPINF2P08697 491 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 IL4RP24394 825 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 MAOBP27338 520 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 NOP2P46087 812 aaKnown RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 ARSEP51690 589 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 CCNHP51946 323 aaPredicted RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 HADHBP55084 474 aaKnown RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 TAS2R40P59535 323 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 IRX4P78413 519 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 CNTN1Q12860 1018 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 MYLK3Q32MK0 819 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 ATP13A4Q4VNC1 1196 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 NCEH1Q6PIU2 408 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 RYBPQ8N488 228 aaPredicted RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 NPWQ8N729 165 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 BIRC7Q96CA5 298 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 BAG1Q99933 345 aaPredicted RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 TM6SF2Q9BZW4 377 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 PDFQ9HBH1 243 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 WASF2Q9Y6W5 498 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 ATXN2Q99700 1313 aaKnown RBP17.64■□□□□ 0.41
MDC1-206ENST00000489540 PLXND1Q9Y4D7 1925 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.64■□□□□ 0.41
MDC1-206ENST00000489540 SOWAHDA6NJG2 315 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 PATE3B3GLJ2 98 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 J3KR12 359 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 FSBPO95073 299 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 CFIP05156 583 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 SERPINB6P35237 376 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 GJC1P36383 396 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 CCR5P51681 352 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 METAP1P53582 386 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 ADPRHP54922 357 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 RHOAP61586 193 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 RAD51Q06609 339 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 IL10RBQ08334 325 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 RFTN1Q14699 578 aaPredicted RBP17.64■□□□□ 0.41
MDC1-206ENST00000489540 CYTH1Q15438 398 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 POM121L1PQ3SYA9 428 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 ZFYVE27Q5T4F4 411 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 LRRC38Q5VT99 294 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 TCEAL6Q6IPX3 200 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 CPNE8Q86YQ8 564 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 GRIN3AQ8TCU5 1115 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 TCEAL3Q969E4 200 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 GDAP1L1Q96MZ0 367 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 ZNF670Q9BS34 389 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 HDAC8Q9BY41 377 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 MIR1-1HGQ9H1L0 117 aa17.64■□□□□ 0.41
MDC1-206ENST00000489540 EIF2B4Q9UI10 523 aaKnown RBP17.64■□□□□ 0.41
MDC1-206ENST00000489540 IPO11Q9UI26 975 aaKnown RBP17.64■□□□□ 0.41
MDC1-206ENST00000489540 THADAQ6YHU6 1953 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3DA0A087WVF3 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3IA0A087WXS9 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3EA0A087X179 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3KA0A087X1G2 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 A0A0A6YYK5 440 aaPredicted RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 A0A1B0GTW7 788 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3FA6NER0 549 aaPredicted RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3LB9A6J9 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 PLRG1O43660 514 aaKnown RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 GDF9O60383 454 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 IGSF6O95976 241 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3HP0C7X1 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 CD27P26842 260 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 LIMK1P53667 647 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 DPYSL3Q14195 570 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 RSPO4Q2I0M5 234 aaPredicted RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 AGBL4Q5VU57 503 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3GQ6DHY5 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3CQ6IPX1 549 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 ERN2Q76MJ5 926 aaKnown RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 LRRC49Q8IUZ0 686 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 TBC1D3Q8IZP1 549 aaPredicted RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 SNX19Q92543 992 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 CALR3Q96L12 384 aaKnown RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 CALN1Q9BXU9 219 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 OSBPL1AQ9BXW6 950 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 ZDHHC6Q9H6R6 413 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 SP110Q9HB58 689 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 CAPN10Q9HC96 672 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 ETNK2Q9NVF9 386 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 CDV3Q9UKY7 258 aaKnown RBP17.63■□□□□ 0.41
MDC1-206ENST00000489540 MFHAS1Q9Y4C4 1052 aa17.63■□□□□ 0.41
MDC1-206ENST00000489540 LNP1A1A4G5 178 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 PLK4O00444 970 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 KRIT1O00522 736 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 BCAT2O15382 392 aaPredicted RBP17.62■□□□□ 0.41
MDC1-206ENST00000489540 PALMO75781 387 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 SYPP08247 313 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 CD48P09326 243 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 KDELR1P24390 212 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 ITGB7P26010 798 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 MMRN1Q13201 1228 aa17.62■□□□□ 0.41
MDC1-206ENST00000489540 ANKRD20A8PQ5CZ79 823 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms