RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 EPB41L5Q9HCM4 733 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 SPASTQ9UBP0 616 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 IL36AQ9UHA7 158 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 PADI4Q9UM07 663 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 TBC1D30Q9Y2I9 924 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 FADS3Q9Y5Q0 445 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 E5RJQ4 531 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 NTN3O00634 580 aaPredicted RBP16.52■□□□□ 0.24
USP48-210ENST00000489108 FPGTO14772 594 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 CLDN11O75508 207 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 LEFTY1O75610 366 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 ENDOD1O94919 500 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 HGFP14210 728 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 NDUFA8P51970 172 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 TLE1Q04724 770 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 TBR1Q16650 682 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 PRRT3Q5FWE3 981 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 KIAA1161Q6NSJ0 714 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 LINGO4Q6UY18 593 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 RRAGAQ7L523 313 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 BTN2A2Q8WVV5 523 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 PPP1R13BQ96KQ4 1090 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 MED15Q96RN5 788 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 DDIT4Q9NX09 232 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 VPS51Q9UID3 782 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 HS3ST4Q9Y661 456 aa16.52■□□□□ 0.24
USP48-210ENST00000489108 IGLON5A6NGN9 336 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 SLC16A3O15427 465 aaKnown RBP16.51■□□□□ 0.23
USP48-210ENST00000489108 CNTN5O94779 1100 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 ANXA6P08133 673 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 ADRB3P13945 408 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 FMO5P49326 533 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 NEK3P51956 506 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 CDH4P55283 916 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 CDK17Q00537 523 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 SGCGQ13326 291 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 UBAP2LQ14157 1087 aaKnown RBP16.51■□□□□ 0.23
USP48-210ENST00000489108 DPY19L3Q6ZPD9 716 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 TMEM110Q86TL2 294 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 DEFB106AQ8N104 65 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 STK32AQ8WU08 396 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 PPP1R16AQ96I34 528 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 LENG8Q96PV6 779 aaPredicted RBP16.51■□□□□ 0.23
USP48-210ENST00000489108 FOXP3Q9BZS1 431 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 SIK2Q9H0K1 926 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 APOBEC3BQ9UH17 382 aaKnown RBP16.51■□□□□ 0.23
USP48-210ENST00000489108 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
USP48-210ENST00000489108 ACSL6Q9UKU0 697 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 PNMA8BQ9ULN7 279 aaPredicted RBP16.51■□□□□ 0.23
USP48-210ENST00000489108 WASF2Q9Y6W5 498 aa16.51■□□□□ 0.23
USP48-210ENST00000489108 SCN8AQ9UQD0 1980 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 LMO7DNF2Z398 122 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 YY2O15391 372 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 RHOCP08134 193 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 L1CAMP32004 1257 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 PRCPP42785 496 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 RECQLP46063 649 aaPredicted RBP16.5■□□□□ 0.23
USP48-210ENST00000489108 PFN3P60673 137 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 CYP4F2P78329 520 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 EIF3IQ13347 325 aaKnown RBP16.5■□□□□ 0.23
USP48-210ENST00000489108 C5orf22Q49AR2 442 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 ANKRD40Q6AI12 368 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 ESRP1Q6NXG1 681 aaKnown RBP16.5■□□□□ 0.23
USP48-210ENST00000489108 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 VASH2Q86V25 355 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
USP48-210ENST00000489108 C1QTNF2Q9BXJ5 285 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 CLPBQ9H078 707 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
USP48-210ENST00000489108 GULP1Q9UBP9 304 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 SEPT3Q9UH03 358 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 RABGEF1Q9UJ41 708 aa16.5■□□□□ 0.23
USP48-210ENST00000489108 A0A0D9SEW6 157 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 PPFIA2O75334 1257 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 PAGE1O75459 146 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 ZNF821O75541 412 aaPredicted RBP16.49■□□□□ 0.23
USP48-210ENST00000489108 LIPCP11150 499 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 GP1BBP13224 206 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 TSHRP16473 764 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 WT1P19544 449 aaPredicted RBP16.49■□□□□ 0.23
USP48-210ENST00000489108 PMS1P54277 932 aaKnown RBP16.49■□□□□ 0.23
USP48-210ENST00000489108 CCL7P80098 99 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 FKBP3Q00688 224 aaKnown RBP16.49■□□□□ 0.23
USP48-210ENST00000489108 PKP1Q13835 747 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 ALFQ53S48 1182 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 MANEAQ5SRI9 462 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 C22orf39Q6P5X5 142 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 PHACTR4Q8IZ21 702 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 LMO3Q8TAP4 145 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 LRRC61Q9BV99 259 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 STRADBQ9C0K7 418 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 SLC25A18Q9H1K4 315 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 PISDQ9UG56 409 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 PCDHGA4Q9Y5G9 962 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 UNC13CQ8NB66 2214 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 TEX15Q9BXT5 2789 aa16.49■□□□□ 0.23
USP48-210ENST00000489108 FAM237AA0A1B0GTK4 181 aa16.48■□□□□ 0.23
USP48-210ENST00000489108 TMX2-CTNND1H3BSU7 103 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms