RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ISG20Q96AZ6 181 aaKnown RBP25.46■■□□□ 1.67
HMGN1-217ENST00000489072 HEPHQ9BQS7 1158 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 PREBQ9HCU5 417 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 AP4E1Q9UPM8 1137 aa25.46■■□□□ 1.67
HMGN1-217ENST00000489072 SPEGQ15772 3267 aa25.45■■□□□ 1.67
HMGN1-217ENST00000489072 KDELR3O43731 214 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 CBFA2T3O75081 653 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 GYPCP04921 128 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 CD38P28907 300 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 C21orf59P57076 290 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 DBX2Q6ZNG2 339 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 ERN2Q76MJ5 926 aaKnown RBP25.45■■□□□ 1.66
HMGN1-217ENST00000489072 FNIP1Q8TF40 1166 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 VOPP1Q96AW1 172 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 SNRNP25Q9BV90 132 aaKnown RBP25.45■■□□□ 1.66
HMGN1-217ENST00000489072 HDAC8Q9BY41 377 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 MYO1AQ9UBC5 1043 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 PCSK1NQ9UHG2 260 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 HPCAL4Q9UM19 191 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 PCDHGB2Q9Y5G2 931 aa25.45■■□□□ 1.66
HMGN1-217ENST00000489072 TRPM6Q9BX84 2022 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 RASA4BC9J798 803 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 RASA4O43374 803 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 GEMIN4P57678 1058 aaKnown RBP25.44■■□□□ 1.66
HMGN1-217ENST00000489072 HNRNPDQ14103 355 aaKnown RBP25.44■■□□□ 1.66
HMGN1-217ENST00000489072 NAPEPLDQ6IQ20 393 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 PRPF39Q86UA1 669 aaKnown RBP25.44■■□□□ 1.66
HMGN1-217ENST00000489072 TRIM11Q96F44 468 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 HMCESQ96FZ2 354 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 XPO4Q9C0E2 1151 aaKnown RBP25.44■■□□□ 1.66
HMGN1-217ENST00000489072 CATSPERBQ9H7T0 1116 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 DYRK4Q9NR20 520 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 HECAQ9UBI9 543 aaPredicted RBP25.44■■□□□ 1.66
HMGN1-217ENST00000489072 PCOLCE2Q9UKZ9 415 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 BZW2Q9Y6E2 419 aaKnown RBP25.44■■□□□ 1.66
HMGN1-217ENST00000489072 SCINQ9Y6U3 715 aa25.44■■□□□ 1.66
HMGN1-217ENST00000489072 FGF10O15520 208 aaPredicted RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 RNGTTO60942 597 aaKnown RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 SERPING1P05155 500 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 MYBL1P10243 752 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 MIPP30301 263 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 GKP32189 559 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 YBEYP58557 167 aaPredicted RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 TPI1P60174 286 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 TRIP6Q15654 476 aaKnown RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 PRAMEF14Q5SWL7 426 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 ERMARDQ5T6L9 678 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 ZNF354CQ86Y25 554 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 PLPP6Q8IY26 295 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 UMODL1-AS1Q8N2C9 162 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 OR6K2Q8NGY2 324 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 SETD7Q8WTS6 366 aaKnown RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 IQCDQ96DY2 449 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 PPP1R16AQ96I34 528 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 KCTD15Q96SI1 283 aaPredicted RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 DHX35Q9H5Z1 703 aaKnown RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 ZDHHC6Q9H6R6 413 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 BTBD3Q9Y2F9 522 aa25.43■■□□□ 1.66
HMGN1-217ENST00000489072 LUC7L2Q9Y383 392 aaKnown RBP25.43■■□□□ 1.66
HMGN1-217ENST00000489072 A0A1W2PQU0 124 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 BUB1O43683 1085 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 LRCH4O75427 683 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 RNF8O76064 485 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 GSRP00390 522 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 SPINK2P20155 84 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 ITGB7P26010 798 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 HTR7P34969 479 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 SERINC3Q13530 473 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 NETO2Q8NC67 525 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 DMTF1Q9Y222 760 aa25.42■■□□□ 1.66
HMGN1-217ENST00000489072 A0A087X0T9 212 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 ZSCAN5CA6NGD5 496 aaPredicted RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 EEF2KO00418 725 aaKnown RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 TMCC1O94876 653 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 FAM228BP0C875 321 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 CASP14P31944 242 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 NUDT1P36639 197 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 CCT8P50990 548 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 NEK3P51956 506 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 IL9RQ01113 521 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 CCDC15Q0P6D6 951 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 PARP15Q460N3 678 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 SETMARQ53H47 684 aaPredicted RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 ATXN7L2Q5T6C5 722 aaPredicted RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 NEK5Q6P3R8 708 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 PARS2Q7L3T8 475 aaKnown RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 RYBPQ8N488 228 aaPredicted RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 OR2AP1Q8NGE2 309 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 BAHD1Q8TBE0 780 aaPredicted RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 KLK6Q92876 244 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 SKA1Q96BD8 255 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 LRRC19Q9H756 370 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 MRPL47Q9HD33 250 aaKnown RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 ZFR2Q9UPR6 939 aaKnown RBP25.41■■□□□ 1.66
HMGN1-217ENST00000489072 CA5BQ9Y2D0 317 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 PCDHB9Q9Y5E1 797 aa25.41■■□□□ 1.66
HMGN1-217ENST00000489072 USP24Q9UPU5 2620 aa25.4■■□□□ 1.66
HMGN1-217ENST00000489072 A0A1B0GTQ1 180 aa25.4■■□□□ 1.66
HMGN1-217ENST00000489072 TLR4O00206 839 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms