RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SAP25Q8TEE9 199 aa11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 TBC1D31Q96DN5 1066 aa11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 KLHDC7BQ96G42 594 aa11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 CNDP2Q96KP4 475 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 ZDHHC6Q9H6R6 413 aa11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 PPARGC1AQ9UBK2 798 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
NIPAL3-207ENST00000488155 PKD1L2Q7Z442 2459 aa11.52□□□□□ -0.56
NIPAL3-207ENST00000488155 FAM221BA6H8Z2 402 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 TMEM8BA6NDV4 472 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 LRRC10BA6NIK2 292 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 SIGLEC16A6NMB1 481 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 PRAMEF26H0Y7S4 382 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 TAF4O00268 1085 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 ENC1O14682 589 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 CREB3O43889 395 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 LDOC1O95751 146 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 CD160O95971 181 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 THEGLP0DJG4 465 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 RHOQP17081 205 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 TNFAIP3P21580 790 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 EPHA8P29322 1005 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 ARRB1P49407 418 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 CLDN2P57739 230 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 INAVAQ3KP66 663 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 MANEALQ5VSG8 457 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 MON1BQ7L1V2 547 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 TMPRSS7Q7RTY8 843 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 NLRP14Q86W24 1093 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 HORMAD1Q86X24 394 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 PCDH20Q8N6Y1 951 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 C3orf20Q8ND61 904 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 MDM1Q8TC05 714 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 CENPIQ92674 756 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 ARHGEF2Q92974 986 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 HEPHQ9BQS7 1158 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 PREBQ9HCU5 417 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 TMEM51Q9NW97 253 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 HECAQ9UBI9 543 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 ZFR2Q9UPR6 939 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 DMTF1Q9Y222 760 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 DAAM1Q9Y4D1 1078 aa11.52□□□□□ -0.57
NIPAL3-207ENST00000488155 CHD6Q8TD26 2715 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 RAMP2O60895 175 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 FERP16591 822 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 MAPKAPK2P49137 400 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 NEK3P51956 506 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 OGDHQ02218 1023 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 NRG1Q02297 640 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 SLC20A2Q08357 652 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 CCDC15Q0P6D6 951 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 POLD3Q15054 466 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 ZNF284Q2VY69 593 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 EFHC2Q5JST6 749 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 LRRC73Q5JTD7 316 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 ATXN7L2Q5T6C5 722 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 ACAD10Q6JQN1 1059 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 CAVIN1Q6NZI2 390 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 FBXL19Q6PCT2 694 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 DCUN1D2Q6PH85 259 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 PARS2Q7L3T8 475 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 SLFN11Q7Z7L1 901 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 PPP1R16AQ96I34 528 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 CALN1Q9BXU9 219 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 CEP44Q9C0F1 390 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 TMEM248Q9NWD8 314 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 GPATCH2LQ9NWQ4 482 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 TPX2Q9ULW0 747 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 HPCAL4Q9UM19 191 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 NEU3Q9UQ49 428 aa11.51□□□□□ -0.57
NIPAL3-207ENST00000488155 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 KRIT1O00522 736 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 BUB1O43683 1085 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 MAGEC1O60732 1142 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 DKK1O94907 266 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 PAK4O96013 591 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 UGT2B4P06133 528 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 ADRB3P13945 408 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 HNRNPA2B1P22626 353 aaKnown RBP11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 ITGB7P26010 798 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 EPHB2P29323 1055 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 L1CAMP32004 1257 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 NUDT1P36639 197 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 ETFBP38117 255 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 RXRGP48443 463 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 ZNF143P52747 638 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 GSCP56915 257 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 ZNF542PQ5EBM4 170 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 KDM7AQ6ZMT4 941 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 IRF2BP2Q7Z5L9 587 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 IQCHQ86VS3 1027 aa11.5□□□□□ -0.57
NIPAL3-207ENST00000488155 MCOLN2Q8IZK6 566 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms