RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ILVBLA1L0T0 632 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 EIF4E1BA6NMX2 242 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 RRP8O43159 456 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 SMAD6O43541 496 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 TLX3O43711 291 aaPredicted RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 LSM8O95777 96 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CYP11B1P15538 503 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 GLDCP23378 1020 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 DGKAP23743 735 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 ITGB7P26010 798 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 OR1E1P30953 314 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 FLT3P36888 993 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 EIF2S3P41091 472 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 SERPINH1P50454 418 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 NEK3P51956 506 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 RNASE9P60153 205 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 UBE2HP62256 183 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 DAB2P98082 770 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 E2F1Q01094 437 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 RAPGEF1Q13905 1077 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CAMK4Q16566 473 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 RETSATQ6NUM9 610 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 LINGO4Q6UY18 593 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 ZNF783Q6ZMS7 281 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 GCNT7Q6ZNI0 430 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 LRRC69Q6ZNQ3 347 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 ABI3BPQ7Z7G0 1075 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 ZSCAN30Q86W11 494 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 XYLT1Q86Y38 959 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 SLC25A45Q8N413 288 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 PCDH20Q8N6Y1 951 aaKnown RBP8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CHST14Q8NCH0 376 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 MSANTD4Q8NCY6 345 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 OR13H1Q8NG92 308 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 FAM174AQ8TBP5 190 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 C18orf8Q96DM3 657 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 IFT43Q96FT9 208 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CALN1Q9BXU9 219 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CEP44Q9C0F1 390 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 PDCL3Q9H2J4 239 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 NDST4Q9H3R1 872 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 FZD3Q9NPG1 666 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 UCKL1Q9NWZ5 548 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 MPP6Q9NZW5 540 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 ZNF212Q9UDV6 495 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 SNX10Q9Y5X0 201 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 ASXL3Q9C0F0 2248 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CHD5Q8TDI0 1954 aa8.72□□□□□ -1.01
PRKCB-208ENST00000487674 CXorf51AA0A1B0GTR3 108 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 A6NNZ2 444 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 FFAR2O15552 330 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 BRINP1O60477 761 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 LEFTY1O75610 366 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ZMPSTE24O75844 475 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 PIAS2O75928 621 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 PCDH8O95206 1070 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ALPPL2P10696 532 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 CKMT1AP12532 417 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ADRB3P13945 408 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ITPKBP27987 946 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ACTN2P35609 894 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 RPS21P63220 83 aaKnown RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 SLC20A2Q08357 652 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 DRAP1Q14919 205 aaPredicted RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 TBC1D25Q3MII6 688 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 VWA3BQ502W6 1294 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 MIIPQ5JXC2 388 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ARTNQ5T4W7 220 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 SEL1L3Q68CR1 1132 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 KIAA1161Q6NSJ0 714 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 KYAT3Q6YP21 454 aaKnown RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 DPY19L3Q6ZPD9 716 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ARCQ7LC44 396 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 BNIPLQ7Z465 357 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 PTAR1Q7Z6K3 402 aaPredicted RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ERICH1Q86X53 443 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 DCP2Q8IU60 420 aaKnown RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 SLC22A18ASQ8N1D0 253 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 OR7D4Q8NG98 312 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 KLK6Q92876 244 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 FGF11Q92914 225 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 HAPLN3Q96S86 360 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 TUBGCP2Q9BSJ2 902 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ZYG11BQ9C0D3 744 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 TNKS2Q9H2K2 1166 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 PRORYQ9H606 182 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 USP29Q9HBJ7 922 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ATP13A1Q9HD20 1204 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 GPR27Q9NS67 375 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 EVA1BQ9NVM1 165 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 NLGN3Q9NZ94 848 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 ZFR2Q9UPR6 939 aaKnown RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 FHOD1Q9Y613 1164 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 WASF2Q9Y6W5 498 aa8.71□□□□□ -1.02
PRKCB-208ENST00000487674 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.02
PRKCB-208ENST00000487674 TDRD6O60522 2096 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms