RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TDRD3Q9H7E2 651 aaKnown RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 POU2F3Q9UKI9 436 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SARDHQ9UL12 918 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SLC27A5Q9Y2P5 690 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PSME4Q14997 1843 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 RNF103-CHMP3A0A140T963 221 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ARSAP15289 507 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 CYP2F1P24903 491 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 OPRL1P41146 370 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 HK2P52789 917 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PGGT1BP53609 377 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 LIMK2P53671 638 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 TMBIM6P55061 237 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 FSTL1Q12841 308 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 EML3Q32P44 896 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 BOLA3Q53S33 107 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PITRM1Q5JRX3 1037 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ABRAXAS1Q6UWZ7 409 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 FAM160B2Q86V87 743 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 BRSK2Q8IWQ3 736 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 CPXCR1Q8N123 301 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 COLGALT1Q8NBJ5 622 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ANKRD36BP1Q96IX9 119 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 CNDP2Q96KP4 475 aaKnown RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 GLT1D1Q96MS3 346 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF641Q96N77 438 aaPredicted RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 TUBA1CQ9BQE3 449 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SNRNP25Q9BV90 132 aaKnown RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ACE2Q9BYF1 805 aaPredicted RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 IL22Q9GZX6 179 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 KLHL25Q9H0H3 589 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 XYLT2Q9H1B5 865 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SPAG4Q9NPE6 437 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ADAM28Q9UKQ2 775 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 COL16A1Q07092 1604 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SLCO1B7G3V0H7 640 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 JRKO75564 520 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 POLBP06746 335 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ATP6V1B2P21281 511 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 HOXA10P31260 410 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 GPD2P43304 727 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 AP3M2P53677 418 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 STX5Q13190 355 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 INAQ16352 499 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 DUOXA2Q1HG44 320 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 HEATR6Q6AI08 1181 aaKnown RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 OR6B2Q6IFH4 312 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ZYG11AQ6WRX3 759 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 FRA10AC1Q70Z53 315 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SNX29P2Q8IUI4 249 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 COLGALT2Q8IYK4 626 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 OR2T34Q8NGX1 318 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 OR2T3Q8NH03 318 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ATP6V0A1Q93050 837 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SH3YL1Q96HL8 342 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TWNKQ96RR1 684 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF347Q96SE7 839 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 CTRCQ99895 268 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 NACA2Q9H009 215 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TASP1Q9H6P5 420 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 NGRNQ9NPE2 291 aaKnown RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 CCM2LQ9NUG4 571 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TMEM181Q9P2C4 612 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 HMGXB4Q9UGU5 601 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 FEM1BQ9UK73 627 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PSME2Q9UL46 239 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 AURKCQ9UQB9 309 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TRAF6Q9Y4K3 522 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 A8MU76 341 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 FAM47E-STBD1D6RA91 191 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 M0QYV0 167 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SDHDO14521 159 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PLA2G6O60733 806 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PCYT1AP49585 367 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TFAMQ00059 246 aaKnown RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PRKCEQ02156 737 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 EMC2Q15006 297 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PLCL1Q15111 1095 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 DGKDQ16760 1214 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TBCELQ5QJ74 424 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 FAM183BPQ6ZVS7 135 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 CCDC60Q8IWA6 550 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 PELI3Q8N2H9 469 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 TMEM130Q8N3G9 435 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SNX31Q8N9S9 440 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 KDM1BQ8NB78 822 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 BPIFB6Q8NFQ5 453 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ABHD11Q8NFV4 315 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SNX19Q92543 992 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SLC39A3Q9BRY0 314 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 SOX17Q9H6I2 414 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-208ENST00000486641 DBNDD1Q9H9R9 158 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 FANCEQ9HB96 536 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 CCDC167Q9P0B6 97 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ERVK-11Q9UQG0 969 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
CCDC171-208ENST00000486641 ACOX3O15254 700 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms