RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 IZUMO3Q5VZ72 239 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 TMEM215Q68D42 235 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 IL31Q6EBC2 164 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 ALG1LQ6GMV1 187 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 ADIPOR2Q86V24 386 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 IQCKQ8N0W5 287 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 PGBD5Q8N414 524 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 ZNF557Q8N988 423 aaPredicted RBP11.52□□□□□ -0.57
SND1-212ENST00000485871 NAT8LQ8N9F0 302 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 USP33Q8TEY7 942 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 PRCCQ92733 491 aaPredicted RBP11.52□□□□□ -0.57
SND1-212ENST00000485871 SNF8Q96H20 258 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 SPON2Q9BUD6 331 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 MUC3BQ9H195 1237 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 GBA3Q9H227 469 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 ETNK1Q9HBU6 452 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 ABCB8Q9NUT2 735 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 SEPT10Q9P0V9 454 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 VPS51Q9UID3 782 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 GGA2Q9UJY4 613 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 SLC27A6Q9Y2P4 619 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 TCRBV7S3A2A0A539 114 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 HMGB1P1B2RPK0 211 aaPredicted RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 AGPSO00116 658 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 PPFIA2O75334 1257 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 TULP3O75386 442 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 STK10O94804 968 aaKnown RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 TMEM63AO94886 807 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 ITIH2P19823 946 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 NFKB1P19838 968 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 CR2P20023 1033 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 SP100P23497 879 aaPredicted RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 PSMB4P28070 264 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 GDI1P31150 447 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 FDFT1P37268 417 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 ADCY8P40145 1251 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 OPRD1P41143 372 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 ITGA8P53708 1063 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 FOXK2Q01167 660 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 MESP2Q0VG99 397 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 CBLBQ13191 982 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 DMC1Q14565 340 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 IHHQ14623 411 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 LBRQ14739 615 aaKnown RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 SLMAPQ14BN4 828 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 CYTH1Q15438 398 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 GEN1Q17RS7 908 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 PARP6Q2NL67 630 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 FAXCQ5TGI0 409 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 ANKRD22Q5VYY1 191 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 KCTD11Q693B1 232 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 LEKR1Q6ZMV7 388 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 PID1Q7Z2X4 250 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 ACDQ96AP0 544 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 FCRL5Q96RD9 977 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 MGME1Q9BQP7 344 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 MLPHQ9BV36 600 aaPredicted RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 TRMT61BQ9BVS5 477 aaKnown RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.57
SND1-212ENST00000485871 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 GTSE1Q9NYZ3 720 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 KLHL8Q9P2G9 620 aaPredicted RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 VPS28Q9UK41 221 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 TPX2Q9ULW0 747 aaKnown RBP11.51□□□□□ -0.57
SND1-212ENST00000485871 C5orf42Q9H799 3197 aa11.51□□□□□ -0.57
SND1-212ENST00000485871 CBX4O00257 560 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 MMP2P08253 660 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 TPSB2P20231 275 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 GJA4P35212 333 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 MMP13P45452 471 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 RGRP47804 291 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 SLC6A11P48066 632 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 DGKGP49619 791 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 RENBPP51606 427 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 PTPN5P54829 565 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 RFTN1Q14699 578 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 TPSAB1Q15661 275 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 INO80DQ53TQ3 878 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 MARC1Q5VT66 337 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 LINGO4Q6UY18 593 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 ARHGEF18Q6ZSZ5 1173 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 ZNF534Q76KX8 674 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 ZNF771Q7L3S4 317 aaPredicted RBP11.5□□□□□ -0.57
SND1-212ENST00000485871 TMC3Q7Z5M5 1100 aa11.5□□□□□ -0.57
SND1-212ENST00000485871 HOOK3Q86VS8 718 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms