RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SYT2Q8N9I0 419 aaPredicted RBP6.91□□□□□ -1.3
SMC4-217ENST00000485867 OVCA2Q8WZ82 227 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 FBXO32Q969P5 355 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 MMS19Q96T76 1030 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 TM9SF2Q99805 663 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 MMTAG2Q9BU76 263 aaKnown RBP6.91□□□□□ -1.3
SMC4-217ENST00000485867 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 TM6SF1Q9BZW5 370 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 BTBD1Q9H0C5 482 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 POLR1BQ9H9Y6 1135 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 THSD1Q9NS62 852 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 PDRG1Q9NUG6 133 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 PLK2Q9NYY3 685 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 SIX4Q9UIU6 781 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 AGO2Q9UKV8 859 aaKnown RBP6.91□□□□□ -1.3
SMC4-217ENST00000485867 SLC27A6Q9Y2P4 619 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 STYXL1Q9Y6J8 313 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 A0A1W2PPC4 97 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 USP12O75317 370 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.3
SMC4-217ENST00000485867 EPHX1P07099 455 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 GSTM1P09488 218 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 PDGFRBP09619 1106 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 ZDHHC11BP0C7U3 371 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 MSL3P1P0C860 447 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 ZNF16P17020 682 aaPredicted RBP6.9□□□□□ -1.3
SMC4-217ENST00000485867 SCP2P22307 547 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 WARSP23381 471 aaKnown RBP6.9□□□□□ -1.3
SMC4-217ENST00000485867 ZNF445P59923 1031 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 E2F1Q01094 437 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 TLE1Q04724 770 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 ST3GAL1Q11201 340 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 TRIM29Q14134 588 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.3
SMC4-217ENST00000485867 MDH1BQ5I0G3 518 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 SNX30Q5VWJ9 437 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 KIAA0895LQ68EN5 471 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 CCDC81Q6ZN84 652 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 SKAP1Q86WV1 359 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 NUP93Q8N1F7 819 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 RBBP8NLQ8NC74 664 aaPredicted RBP6.9□□□□□ -1.3
SMC4-217ENST00000485867 OR2T3Q8NH03 318 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 MYCBPAPQ8TBZ2 947 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 UCMAQ8WVF2 138 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 RAB34Q9BZG1 259 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 ZNF518BQ9C0D4 1074 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 ELOVL4Q9GZR5 314 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 GP6Q9HCN6 339 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 GDF3Q9NR23 364 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 KCND2Q9NZV8 630 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 CHORDC1Q9UHD1 332 aaPredicted RBP6.9□□□□□ -1.3
SMC4-217ENST00000485867 ITGA11Q9UKX5 1188 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 ODF2LQ9ULJ1 636 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 MAN2B2Q9Y2E5 1009 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 NME7Q9Y5B8 376 aa6.9□□□□□ -1.3
SMC4-217ENST00000485867 RP1L1Q8IWN7 2480 aaPredicted RBP6.9□□□□□ -1.31
SMC4-217ENST00000485867 ITPR3Q14573 2671 aa6.9□□□□□ -1.31
SMC4-217ENST00000485867 UTP20O75691 2785 aaKnown RBP6.9□□□□□ -1.31
SMC4-217ENST00000485867 A0A1W2PR77 199 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 CLDN5O00501 218 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 TLR5O60602 858 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 PENKP01210 267 aaPredicted RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 KRT19P08727 400 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 RXRGP48443 463 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 MAPKAPK2P49137 400 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 ARRB1P49407 418 aaPredicted RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 PGFP49763 221 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 ZNF131P52739 623 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 RBP5P82980 135 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 GTF2BQ00403 316 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 GUCY1B3Q02153 619 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 VMACQ2NL98 169 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 ARL13BQ3SXY8 428 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 HYIQ5T013 277 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 HIST2H2BCQ6DN03 193 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 SLFN12LQ6IEE8 588 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 SERPINA13PQ6UXR4 307 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 ANKS1BQ7Z6G8 1248 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 BRSK2Q8IWQ3 736 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 CSGALNACT2Q8N6G5 542 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 NSUN7Q8NE18 718 aaKnown RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 SCAMP5Q8TAC9 235 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 CACTINQ8WUQ7 758 aaKnown RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 SORCS1Q8WY21 1168 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 SKA1Q96BD8 255 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 PIWIL1Q96J94 861 aaKnown RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 DEPDC7Q96QD5 511 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 FIZ1Q96SL8 496 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 REEP2Q9BRK0 252 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 NACA2Q9H009 215 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 IKZF4Q9H2S9 585 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 EBF2Q9HAK2 575 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 SGK2Q9HBY8 427 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 ELOVL2Q9NXB9 296 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 IL37Q9NZH6 218 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 LSM7Q9UK45 103 aaKnown RBP6.89□□□□□ -1.31
SMC4-217ENST00000485867 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
SMC4-217ENST00000485867 ZFC3H1O60293 1989 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms