RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 MMP13P45452 471 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 RGRP47804 291 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 NUMBP49757 651 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 RENBPP51606 427 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 CLCN5P51795 746 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 GDF10P55107 478 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 SEC13P55735 322 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 RHOAP61586 193 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ST8SIA6P61647 398 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 AP1S1P61966 158 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 CKAP4Q07065 602 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 NSUN2Q08J23 767 aaKnown RBP eCLIP6.53□□□□□ -1.36
NCL-209ENST00000484328 AP1B1Q10567 949 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ELAVL3Q14576 367 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 DLG2Q15700 870 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 P3H1Q32P28 736 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 FNDC3BQ53EP0 1204 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 C9orf64Q5T6V5 341 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 EMC10Q5UCC4 262 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 MARC1Q5VT66 337 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 SERPINA13PQ6UXR4 307 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 LEKR1Q6ZMV7 388 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 Q6ZVU0 165 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 SYT13Q7L8C5 426 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 CHPFQ8IZ52 775 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ZNF567Q8N184 647 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ATP11CQ8NB49 1132 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 TSEN2Q8NCE0 465 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 SPATA4Q8NEY3 305 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 OR2AP1Q8NGE2 309 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 RPLP0P6Q8NHW5 317 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ARRDC2Q8TBH0 407 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 C1orf54Q8WWF1 131 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ZNF592Q92610 1267 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 FAM131CQ96AQ9 280 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 TADA1Q96BN2 335 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 TEKT5Q96M29 485 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 GDAP1L1Q96MZ0 367 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 SPATA13Q96N96 652 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 TMEM121Q9BTD3 319 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 CINPQ9BW66 212 aaPredicted RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 AP1M1Q9BXS5 423 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 POLR1EQ9GZS1 481 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 FBRSQ9HAH7 460 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 LMAN1LQ9HAT1 526 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ZDHHC4Q9NPG8 344 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 PCYOX1Q9UHG3 505 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 DRG1Q9Y295 367 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 SIT1Q9Y3P8 196 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 NEU2Q9Y3R4 380 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 ZNF106Q9H2Y7 1883 aaKnown RBP6.53□□□□□ -1.36
NCL-209ENST00000484328 SCN8AQ9UQD0 1980 aa6.53□□□□□ -1.36
NCL-209ENST00000484328 MYLKQ15746 1914 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 TSPAN11A1L157 253 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 H7C0C1 242 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 OPHN1O60890 802 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 ATG13O75143 517 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 SIN3BO75182 1162 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 GCATO75600 419 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 URI1O94763 535 aaPredicted RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 KLF8O95600 359 aaPredicted RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 IGSF6O95976 241 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 CTSLP07711 333 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 MMP2P08253 660 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 HLA-EP13747 358 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 HOXB2P14652 356 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 COL9A1P20849 921 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 STIP1P31948 543 aaKnown RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 CD68P34810 354 aaPredicted RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 TIE1P35590 1138 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 COILP38432 576 aaPredicted RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 NNMTP40261 264 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 PAFAH1B1P43034 410 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 PTGIRP43119 386 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 MAPK8P45983 427 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 ATP5OP48047 213 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 CCNHP51946 323 aaPredicted RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 COPAP53621 1224 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 NRLP54845 237 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 SNX1Q13596 522 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 ZNF235Q14590 738 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 IHHQ14623 411 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 CRY1Q16526 586 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 TEX44Q53QW1 395 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 C2orf27AQ580R0 203 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 CARD16Q5EG05 197 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 EOGTQ5NDL2 527 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 KIAA1211LQ6NV74 962 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 DARS2Q6PI48 645 aaKnown RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 CCDC137Q6PK04 289 aaKnown RBP6.52□□□□□ -1.37
NCL-209ENST00000484328 TMEM92Q6UXU6 159 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 B4GALNT4Q76KP1 1039 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 ZNF354CQ86Y25 554 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 BBS5Q8N3I7 341 aa6.52□□□□□ -1.37
NCL-209ENST00000484328 SPEM1Q8N4L4 309 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms