RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TK2O00142 265 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CCP110O43303 1012 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 RNF8O76064 485 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3HP0C7X1 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 FAM228BP0C875 321 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CDK4P11802 303 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 EPHA8P29322 1005 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 L1CAMP32004 1257 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 PCK1P35558 622 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 ETFBP38117 255 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CTSOP43234 321 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 NUMBP49757 651 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 RPL7AP62424 266 aaKnown RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CCDC173Q0VFZ6 552 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 PIGHQ14442 188 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CDO1Q16878 200 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 C15orf59Q2T9L4 293 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 ASTE1Q2TB18 679 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 HNRNPA1L2Q32P51 320 aaKnown RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 SLC45A4Q5BKX6 768 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 EFHC2Q5JST6 749 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 C9orf64Q5T6V5 341 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3GQ6DHY5 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3CQ6IPX1 549 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TMC6Q7Z403 805 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 SLFN11Q7Z7L1 901 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 FAM131BQ86XD5 332 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 TBC1D3Q8IZP1 549 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CFAP52Q8N1V2 620 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 MYO19Q96H55 970 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 CCDC42Q96M95 316 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 ZYG11BQ9C0D3 744 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 NRSN2Q9GZP1 204 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 SIK2Q9H0K1 926 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 UVRAGQ9P2Y5 699 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 OR12D3Q9UGF7 316 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 INTS6Q9UL03 887 aaKnown RBP10.23□□□□□ -0.77
CPSF4-213ENST00000484112 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 ERVW-1Q9UQF0 538 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 SHROOM3Q8TF72 1996 aa10.23□□□□□ -0.77
CPSF4-213ENST00000484112 A0A1W2PR77 199 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 I6L893 689 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 TLR4O00206 839 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 YKT6O15498 198 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 AKR1B10O60218 316 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 BRINP1O60477 761 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 SDC3O75056 442 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 IL1BP01584 269 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 CYP1A2P05177 515 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 PLEKP08567 350 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 H2AFZP0C0S5 128 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 GLDCP23378 1020 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 PSMA2P25787 234 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 EIF4A3P38919 411 aaKnown RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 NNMTP40261 264 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 MAPKAPK2P49137 400 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF75DP51815 510 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 NXPH1P58417 271 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 CXADRP78310 365 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 KRT83P78385 493 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 RTP5Q14D33 572 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 FSCBQ5H9T9 825 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 PITRM1Q5JRX3 1037 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 CCDC122Q5T0U0 273 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 MANEALQ5VSG8 457 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 RNF219Q5W0B1 726 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 CXorf57Q6NSI4 855 aaKnown RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 FBXL19Q6PCT2 694 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 H2AFVQ71UI9 128 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 GPR155Q7Z3F1 870 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 PHLDB2Q86SQ0 1253 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 STK40Q8N2I9 435 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 NIPA2Q8N8Q9 360 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 FGF11Q92914 225 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 MYEOVQ96EZ4 313 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 NAF1Q96HR8 494 aaKnown RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 RPL10LQ96L21 214 aaKnown RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 MRGPRX3Q96LB0 322 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 C2orf49Q9BVC5 232 aaPredicted RBP10.22□□□□□ -0.77
CPSF4-213ENST00000484112 ANLNQ9NQW6 1124 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 IP6K2Q9UHH9 426 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 SLCO3A1Q9UIG8 710 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 INTUQ9ULD6 942 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 FREM2Q5SZK8 3169 aa10.22□□□□□ -0.77
CPSF4-213ENST00000484112 PLXNA2O75051 1894 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 CELSR3Q9NYQ7 3312 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 EDDM13A0A1B0GTR0 161 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 ILVBLA1L0T0 632 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 TARSL2A2RTX5 802 aaKnown RBP10.21□□□□□ -0.77
CPSF4-213ENST00000484112 FGF10O15520 208 aaPredicted RBP10.21□□□□□ -0.77
CPSF4-213ENST00000484112 TMEM253P0C7T8 217 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 PLA2G2AP14555 144 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 RHOQP17081 205 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 GOT1P17174 413 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 CKMT2P17540 419 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 OR1E1P30953 314 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 MAT2AP31153 395 aaKnown RBP10.21□□□□□ -0.77
CPSF4-213ENST00000484112 ACTN2P35609 894 aa10.21□□□□□ -0.77
CPSF4-213ENST00000484112 CCR5P51681 352 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms