RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
TMEM54-206ENST00000482771 IL12RB2Q99665 862 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 SPON2Q9BUD6 331 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 ASNSD1Q9NWL6 643 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 NCKIPSDQ9NZQ3 722 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 PCDHGA8Q9Y5G5 932 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 EME2A4GXA9 379 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 IGLON5A6NGN9 336 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 DRGXA6NNA5 263 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 H3BM21 787 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 MUSKO15146 869 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 CASC3O15234 703 aaKnown RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 SPINT1O43278 529 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 LZTS3O60299 673 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 AFPP02771 609 aaKnown RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 RABIFP47224 123 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 CLCN6P51797 869 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 NEK3P51956 506 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 C1orf61Q13536 156 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 PDE1CQ14123 709 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 NR0B2Q15466 257 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 PERM1Q5SV97 790 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 KIAA1161Q6NSJ0 714 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 TTI2Q6NXR4 508 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 GJB7Q6PEY0 223 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 KYAT3Q6YP21 454 aaKnown RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 C11orf57Q6ZUT1 292 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-206ENST00000482771 PARGQ86W56 976 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 PASD1Q8IV76 773 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 ARL14Q8N4G2 192 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 PPP1R16AQ96I34 528 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 TKTL2Q9H0I9 626 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 ANLNQ9NQW6 1124 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 GPR27Q9NS67 375 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 MPP6Q9NZW5 540 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 FADS3Q9Y5Q0 445 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 WASF2Q9Y6W5 498 aa13.08□□□□□ -0.32
TMEM54-206ENST00000482771 GOLGA6L4A6NEF3 574 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 CDRT15L2A8MXV6 281 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 FPGTO14772 594 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 TPP1O14773 563 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 EFSO43281 561 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 ZNF821O75541 412 aaPredicted RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 GCATO75600 419 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 ADRB3P13945 408 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 OR1E1P30953 314 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 L1CAMP32004 1257 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 NOS2P35228 1153 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 CXCR3P49682 368 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 RNASE9P60153 205 aaKnown RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 SLC6A3Q01959 620 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 EIF2B5Q13144 721 aaKnown RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 CLN3Q13286 438 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 DRAP1Q14919 205 aaPredicted RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 CARD16Q5EG05 197 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 TPRG1LQ5T0D9 272 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 FAM183BPQ6ZVS7 135 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 TFAP2DQ7Z6R9 452 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 SETD3Q86TU7 594 aaPredicted RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 TRIM59Q8IWR1 403 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 DCAF4L2Q8NA75 395 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 OR7D4Q8NG98 312 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 WDR36Q8NI36 951 aaKnown RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 NELFBQ8WX92 580 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 KLF6Q99612 283 aaPredicted RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 CRACR2AQ9BSW2 395 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 C1QTNF2Q9BXJ5 285 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 SPASTQ9UBP0 616 aa13.07□□□□□ -0.32
TMEM54-206ENST00000482771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMEM54-206ENST00000482771 BECN2A8MW95 431 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 I6L893 689 aaPredicted RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 TCEA3O75764 348 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 ERBB2P04626 1255 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 TFE3P19532 575 aaPredicted RBP13.06□□□□□ -0.32
TMEM54-206ENST00000482771 ITGB7P26010 798 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 RPIAP49247 311 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 STX17P56962 302 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 RETSATQ6NUM9 610 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 OLFML1Q6UWY5 402 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 ENOSF1Q7L5Y1 443 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 PRICKLE2Q7Z3G6 844 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 ZNF683Q8IZ20 524 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 EXD3Q8N9H8 876 aa13.06□□□□□ -0.32
TMEM54-206ENST00000482771 BTN2A2Q8WVV5 523 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms