RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TFB1MQ8WVM0 346 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 GIMAP1Q8WWP7 306 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 SORCS1Q8WY21 1168 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ATG4AQ8WYN0 398 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 TTC17Q96AE7 1141 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 HDAC11Q96DB2 347 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 RPL10LQ96L21 214 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 TSGA13Q96PP4 275 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 BRD8Q9H0E9 1235 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 NDRG2Q9UN36 371 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ITM2BQ9Y287 266 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ATG2BQ96BY7 2078 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 MYO18AQ92614 2054 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 GOLGA6L10A0A0M3HER8 536 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 PDE2AO00408 941 aaPredicted RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 PRAMEF11O60813 436 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ZMPSTE24O75844 475 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 EGFP01133 1207 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 DLDP09622 509 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 DRD1P21728 446 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 CTSOP43234 321 aaPredicted RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 TNFRSF4P43489 277 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ARF5P84085 180 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 ECT2LQ008S8 904 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 SLC7A5Q01650 507 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 IL10RBQ08334 325 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 PPIDQ08752 370 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 SNX1Q13596 522 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 CCNG2Q16589 344 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 FSTL4Q6MZW2 842 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 TIGD7Q6NT04 549 aaPredicted RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 DARS2Q6PI48 645 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 SPATA21Q7Z572 469 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 CYB5D2Q8WUJ1 264 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 FRMD8P1Q9BZ68 369 aaPredicted RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 DNPEPQ9ULA0 475 aa11.8□□□□□ -0.52
HPS4-212ENST00000481910 MRPS17Q9Y2R5 130 aaKnown RBP11.8□□□□□ -0.52
HPS4-212ENST00000481910 ZSCAN5CA6NGD5 496 aaPredicted RBP11.79□□□□□ -0.52
HPS4-212ENST00000481910 HACD1B0YJ81 288 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 K7EQS6 105 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 LIASO43766 372 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 MT-CO1P00395 513 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 ASLP04424 464 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 NNMTP40261 264 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 SEC13P55735 322 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 CORO7P57737 925 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 STARD6P59095 220 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 ZNF33AQ06730 810 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 BYSLQ13895 437 aaKnown RBP11.79□□□□□ -0.52
HPS4-212ENST00000481910 SLC45A4Q5BKX6 768 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 EMC10Q5UCC4 262 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 CCDC13Q8IYE1 715 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 PRELID2Q8N945 189 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 SLC35B2Q8TB61 432 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 NSMCE1Q8WV22 266 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 EZH1Q92800 747 aaPredicted RBP11.79□□□□□ -0.52
HPS4-212ENST00000481910 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 C10orf88Q9H8K7 445 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 SLC25A13Q9UJS0 675 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 ERVW-1Q9UQF0 538 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 ACTL7AQ9Y615 435 aa11.79□□□□□ -0.52
HPS4-212ENST00000481910 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 KCNK1O00180 336 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 MATN3O15232 486 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 CCNB1P14635 433 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 STK19P49842 368 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 GEMIN4P57678 1058 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 ST8SIA6P61647 398 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 PRKD1Q15139 912 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 PTPRNQ16849 979 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ACCSLQ4AC99 568 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 HEATR6Q6AI08 1181 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 LMNTD2Q8IXW0 634 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 MYO1HQ8N1T3 1032 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ATP11CQ8NB49 1132 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 EDAQ92838 391 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 MAGOHBQ96A72 148 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 RSRC1Q96IZ7 334 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 NELL2Q99435 816 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 FERMT1Q9BQL6 677 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 TMEM121Q9BTD3 319 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 SEPT10Q9P0V9 454 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 SLCO3A1Q9UIG8 710 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ZNF148Q9UQR1 794 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 STARD13Q9Y3M8 1113 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 MRFAP1Q9Y605 127 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 CXorf51AA0A1B0GTR3 108 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 ANTXRLA6NF34 631 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 K7ERQ8 282 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 DCXO43602 365 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 CD160O95971 181 aa11.78□□□□□ -0.52
HPS4-212ENST00000481910 SRPRAP08240 638 aaKnown RBP11.78□□□□□ -0.52
HPS4-212ENST00000481910 RBL1P28749 1068 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms