RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 KLF6Q99612 283 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-212ENST00000479586 FUCA2Q9BTY2 467 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.71■□□□□ 0.43
HMGN1-212ENST00000479586 PISDQ9UG56 409 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 IL36AQ9UHA7 158 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 SLC12A6Q9UHW9 1150 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 VPS51Q9UID3 782 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 VANGL2Q9ULK5 521 aa17.71■□□□□ 0.43
HMGN1-212ENST00000479586 SYNJ2BP-COX16A0A087WUM0 186 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 LMO7DNF2Z398 122 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 FPGTO14772 594 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 LEFTY1O75610 366 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 ADRB3P13945 408 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 GPD2P43304 727 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 NEK3P51956 506 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 AUHQ13825 339 aaKnown RBP17.7■□□□□ 0.42
HMGN1-212ENST00000479586 STILQ15468 1287 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 LINGO4Q6UY18 593 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 PTRH1Q86Y79 214 aaKnown RBP17.7■□□□□ 0.42
HMGN1-212ENST00000479586 PHACTR4Q8IZ21 702 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 BTN2A2Q8WVV5 523 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 LRRC61Q9BV99 259 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 CLPBQ9H078 707 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 EPN3Q9H201 632 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 FAM204AQ9H8W3 233 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 POPDC2Q9HBU9 364 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 GEMIN8Q9NWZ8 242 aaKnown RBP17.7■□□□□ 0.42
HMGN1-212ENST00000479586 COX16Q9P0S2 106 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 FADS3Q9Y5Q0 445 aa17.7■□□□□ 0.42
HMGN1-212ENST00000479586 CLEC18AA5D8T8 446 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 D6RAR5 112 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 AGRPO00253 132 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 CETN3O15182 167 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 ENDOD1O94919 500 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 ANXA6P08133 673 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 ITIH1P19827 911 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 PFN3P60673 137 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 CCL7P80098 99 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 TAF5Q15542 800 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 SKIDA1Q1XH10 827 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 C22orf39Q6P5X5 142 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 CLEC18BQ6UXF7 455 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 DPY19L3Q6ZPD9 716 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 ZFAND4Q86XD8 727 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 CLEC18CQ8NCF0 446 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 CCDC47Q96A33 483 aaKnown RBP17.69■□□□□ 0.42
HMGN1-212ENST00000479586 CCDC74AQ96AQ1 378 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 PPP1R16AQ96I34 528 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 FEM1CQ96JP0 617 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 GFM1Q96RP9 751 aaKnown RBP17.69■□□□□ 0.42
HMGN1-212ENST00000479586 TRIM62Q9BVG3 475 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 STRADBQ9C0K7 418 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 SEPT10Q9P0V9 454 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 TBC1D30Q9Y2I9 924 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 WASF2Q9Y6W5 498 aa17.69■□□□□ 0.42
HMGN1-212ENST00000479586 ZFC3H1O60293 1989 aaKnown RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 PRAMEF33A0A0G2JMD5 474 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 IGLON5A6NGN9 336 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 E5RJQ4 531 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 NVLO15381 856 aaKnown RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 YY2O15391 372 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 PRAMEF10O60809 474 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 CLDN11O75508 207 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 CELA2BP08218 269 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 JMJD7P0C870 316 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 CCR1P32246 355 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 YWHAZP63104 245 aaKnown RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 KRT83P78385 493 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 DPYDQ12882 1025 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 IGFBP7Q16270 282 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 ESRP1Q6NXG1 681 aaKnown RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 DENND1BQ6P3S1 775 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 SMYD4Q8IYR2 804 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 SDR16C5Q8N3Y7 309 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 ZSCAN1Q8NBB4 408 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 KYQ8NBH2 561 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 LENG8Q96PV6 779 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 C1QTNF2Q9BXJ5 285 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 SIRPGQ9P1W8 387 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 GULP1Q9UBP9 304 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 USP25Q9UHP3 1055 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 MAN2B2Q9Y2E5 1009 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 LOXL2Q9Y4K0 774 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 HS3ST4Q9Y661 456 aa17.68■□□□□ 0.42
HMGN1-212ENST00000479586 SPTBN1Q01082 2364 aaKnown RBP17.68■□□□□ 0.42
HMGN1-212ENST00000479586 TEP1Q99973 2627 aaKnown RBP17.67■□□□□ 0.42
HMGN1-212ENST00000479586 A0A1W2PQM1 296 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 CNTN5O94779 1100 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 RPLP0P05388 317 aaKnown RBP17.67■□□□□ 0.42
HMGN1-212ENST00000479586 SLC2A3P11169 496 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 TSHRP16473 764 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 ITGB7P26010 798 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 ACADSBP45954 432 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 FOXK1P85037 733 aa17.67■□□□□ 0.42
HMGN1-212ENST00000479586 SGCGQ13326 291 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms