RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ALG3Q92685 438 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 HES6Q96HZ4 224 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 CCDC114Q96M63 670 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 ZNF599Q96NL3 588 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 SLC6A17Q9H1V8 727 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 SP110Q9HB58 689 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 NUP205Q92621 2012 aa27.26■■□□□ 1.95
CCM2-211ENST00000478582 hCG_1818297A0A087WSY0 165 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 MAFKO60675 156 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 RNASEH1O60930 286 aaKnown RBP27.25■■□□□ 1.95
CCM2-211ENST00000478582 RFTN1Q14699 578 aaPredicted RBP27.25■■□□□ 1.95
CCM2-211ENST00000478582 PMS2CLQ68D20 193 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 LEKR1Q6ZMV7 388 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 PRR23CQ6ZRP0 262 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 RFX6Q8HWS3 928 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 REXO1L1PQ8IX06 675 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 OR8D1Q8WZ84 308 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 SPACA7Q96KW9 195 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 ALS2CR12Q96Q35 445 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 ITM2CQ9NQX7 267 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 DTLQ9NZJ0 730 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 SCML1Q9UN30 329 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 EFR3BQ9Y2G0 817 aa27.25■■□□□ 1.95
CCM2-211ENST00000478582 FARP1Q9Y4F1 1045 aaPredicted RBP27.25■■□□□ 1.95
CCM2-211ENST00000478582 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.25■■□□□ 1.95
CCM2-211ENST00000478582 THADAQ6YHU6 1953 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 DDX3YO15523 660 aaKnown RBP27.24■■□□□ 1.95
CCM2-211ENST00000478582 ZNF217O75362 1048 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 TMCC1O94876 653 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 ZNF806P0C7X5 589 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 SDHBP21912 280 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 BCKDHBP21953 392 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 PTPN7P35236 360 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 GBE1Q04446 702 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 SLC10A2Q12908 348 aaPredicted RBP27.24■■□□□ 1.95
CCM2-211ENST00000478582 CYTH1Q15438 398 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 RSPO4Q2I0M5 234 aaPredicted RBP27.24■■□□□ 1.95
CCM2-211ENST00000478582 MAP7D1Q3KQU3 841 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 CARD16Q5EG05 197 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 ATPAF2Q8N5M1 289 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 TRIM58Q8NG06 486 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 TSGA13Q96PP4 275 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 DLL3Q9NYJ7 618 aa27.24■■□□□ 1.95
CCM2-211ENST00000478582 USP36Q9P275 1121 aaKnown RBP27.24■■□□□ 1.95
CCM2-211ENST00000478582 NYNRINQ9P2P1 1898 aaKnown RBP27.23■■□□□ 1.95
CCM2-211ENST00000478582 GSRP00390 522 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 KRT10P13645 584 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 MX2P20592 715 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 GARSP41250 739 aaKnown RBP27.23■■□□□ 1.95
CCM2-211ENST00000478582 RECQLP46063 649 aaPredicted RBP27.23■■□□□ 1.95
CCM2-211ENST00000478582 PUM1Q14671 1186 aaKnown RBP eCLIP27.23■■□□□ 1.95
CCM2-211ENST00000478582 PLA2G2CQ5R387 149 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 KIAA1324Q6UXG2 1013 aaKnown RBP27.23■■□□□ 1.95
CCM2-211ENST00000478582 DSG4Q86SJ6 1040 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 CCDC50Q8IVM0 306 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 FATE1Q969F0 183 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 TNKS2Q9H2K2 1166 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 PPM1HQ9ULR3 514 aa27.23■■□□□ 1.95
CCM2-211ENST00000478582 PACSIN2Q9UNF0 486 aaPredicted RBP27.23■■□□□ 1.95
CCM2-211ENST00000478582 PLXND1Q9Y4D7 1925 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 PEX11BO96011 259 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 IGLV3-19P01714 112 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 MPLP40238 635 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 CST6Q15828 149 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 TMCO4Q5TGY1 634 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 MEI1Q5TIA1 1274 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 DPY19L3Q6ZPD9 716 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 FRMD1Q8N878 549 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 OR2AP1Q8NGE2 309 aa27.22■■□□□ 1.95
CCM2-211ENST00000478582 BCLAF3A2AJT9 711 aaKnown RBP27.21■■□□□ 1.95
CCM2-211ENST00000478582 MAP3K13O43283 966 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 CST8O60676 142 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 PYGMP11217 842 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 ACADMP11310 421 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 TGM2P21980 687 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 CCNCP24863 283 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 CHRNA3P32297 505 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 CETN2P41208 172 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 NR2C2P49116 596 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 SNRPD1P62314 119 aaKnown RBP27.21■■□□□ 1.95
CCM2-211ENST00000478582 CCDC6Q16204 474 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 MMAAQ8IVH4 418 aaKnown RBP27.21■■□□□ 1.95
CCM2-211ENST00000478582 TMIEQ8NEW7 156 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 HDAC11Q96DB2 347 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 PABPC3Q9H361 631 aaKnown RBP27.21■■□□□ 1.95
CCM2-211ENST00000478582 LHX3Q9UBR4 397 aa27.21■■□□□ 1.95
CCM2-211ENST00000478582 MBD1Q9UIS9 605 aaPredicted RBP27.21■■□□□ 1.95
CCM2-211ENST00000478582 CEP250Q9BV73 2442 aa27.2■■□□□ 1.95
CCM2-211ENST00000478582 DMXL1Q9Y485 3027 aa27.2■■□□□ 1.95
CCM2-211ENST00000478582 BNIP3LO60238 219 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 ADH1BP00325 375 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 DNTTP04053 509 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 DNA2P51530 1060 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 TPMTP51580 245 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 RHOAP61586 193 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 CREB5Q02930 508 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 ADCY2Q08462 1091 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 SFSWAPQ12872 951 aaKnown RBP27.2■■□□□ 1.94
CCM2-211ENST00000478582 LBRQ14739 615 aaKnown RBP27.2■■□□□ 1.94
CCM2-211ENST00000478582 KAZNQ674X7 775 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms