RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CAMK2BQ13554 666 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 ZNF284Q2VY69 593 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 C2CD6Q53TS8 623 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 HES3Q5TGS1 186 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 CLEC17AQ6ZS10 378 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 PTAR1Q7Z6K3 402 aaPredicted RBP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 ZNF354CQ86Y25 554 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 CACTIN-AS1Q8N1I8 211 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 EMC1Q8N766 993 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 CHST14Q8NCH0 376 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 RXFP2Q8WXD0 754 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 CASKIN2Q8WXE0 1202 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 TSC1Q92574 1164 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 NTAN1Q96AB6 310 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 MYOCQ99972 504 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 DUSP23Q9BVJ7 150 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 C1QTNF7Q9BXJ2 289 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 NRSN2Q9GZP1 204 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 ZDHHC6Q9H6R6 413 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 NLRC4Q9NPP4 1024 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 TMEM248Q9NWD8 314 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 ADAM22Q9P0K1 906 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 HS3ST3A1Q9Y663 406 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 WASF2Q9Y6W5 498 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 C2CD4BA6NLJ0 364 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 RRP8O43159 456 aaKnown RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 SDC3O75056 442 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 ZMPSTE24O75844 475 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 GSRP00390 522 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 RABIFP47224 123 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 DUSP3P51452 185 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 AIF1P55008 147 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 JAM2P57087 298 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 FMO1Q01740 532 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 MYL5Q02045 173 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 BNIP3Q12983 259 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 STX1AQ16623 288 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 TMEM259Q4ZIN3 620 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 EFHC2Q5JST6 749 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 KYAT3Q6YP21 454 aaKnown RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 LRRC69Q6ZNQ3 347 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 C3orf20Q8ND61 904 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 OR2AP1Q8NGE2 309 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 OR4C6Q8NH72 309 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 FAM172AQ8WUF8 416 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 SLC20A1Q8WUM9 679 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 BAP1Q92560 729 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 SLC17A9Q9BYT1 436 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 TMPRSS4Q9NRS4 437 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 SEPT11Q9NVA2 429 aaKnown RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 NLGN3Q9NZ94 848 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 HECAQ9UBI9 543 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 ZNF212Q9UDV6 495 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 IPO11Q9UI26 975 aaKnown RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 RALYQ9UKM9 306 aaKnown RBP14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 AK5Q9Y6K8 562 aa14.71□□□□□ -0.05
SMARCE1-209ENST00000478349 A0A087WV48 116 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 LGALS16A8MUM7 142 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 FPGTO14772 594 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 POP4O95707 220 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 PLEKP08567 350 aaPredicted RBP14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 CDK11BP21127 795 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 GPD1P21695 349 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 GLDCP23378 1020 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 DGKAP23743 735 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 ABCG1P45844 678 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 ARF5P84085 180 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 PROX2Q3B8N5 592 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 CCDC14Q49A88 953 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 ZNF805Q5CZA5 627 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 MANEALQ5VSG8 457 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 TRNP1Q6NT89 227 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 DNAJC24Q6P3W2 148 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 KANSL1Q7Z3B3 1105 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 ABI3BPQ7Z7G0 1075 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 SLFN11Q7Z7L1 901 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 PDZD3Q86UT5 571 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 PARGQ86W56 976 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 DENND6BQ8NEG7 585 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 OR13H1Q8NG92 308 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 RFFLQ8WZ73 363 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 KLK6Q92876 244 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 ARHGEF2Q92974 986 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 GDAP1L1Q96MZ0 367 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 EPAS1Q99814 870 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 TM6SF2Q9BZW4 377 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 CLCA2Q9UQC9 943 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 FCF1Q9Y324 198 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 FADS3Q9Y5Q0 445 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 CABIN1Q9Y6J0 2220 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 ZZEF1O43149 2961 aa14.7□□□□□ -0.06
SMARCE1-209ENST00000478349 PLXNA2O75051 1894 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 NYNRINQ9P2P1 1898 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 ZFYVE26Q68DK2 2539 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 KNL1Q8NG31 2342 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 FAM170AA1A519 330 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 EIF4E1BA6NMX2 242 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 KRIT1O00522 736 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 SIGLEC6O43699 453 aa14.69□□□□□ -0.06
SMARCE1-209ENST00000478349 PIAS2O75928 621 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms