RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NDUFS2O75306 463 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 RNASEH2AO75792 299 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 GKP32189 559 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 CHRNA3P32297 505 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 ACSL1P33121 698 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 SERPINB6P35237 376 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 PTGER3P43115 390 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 DHPSP49366 369 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 CCNHP51946 323 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 GEMIN4P57678 1058 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 RHOAP61586 193 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 DYNLT1P63172 113 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 ZBTB16Q05516 673 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 CCDC6Q16204 474 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 CARD16Q5EG05 197 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 LAIR1Q6GTX8 287 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 LPCAT2Q7L5N7 544 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 DSG4Q86SJ6 1040 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 METTL3Q86U44 580 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 ALYREFQ86V81 257 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 PACS2Q86VP3 889 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 RFX6Q8HWS3 928 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 TXLNBQ8N3L3 684 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 AADATQ8N5Z0 425 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 LZTR1Q8N653 840 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 PCDH20Q8N6Y1 951 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 PQLC3Q8N755 202 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 PIP4K2CQ8TBX8 421 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 LRRN4Q8WUT4 740 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 FAF2Q96CS3 445 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 OMDQ99983 421 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 GPR174Q9BXC1 333 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 ZDHHC6Q9H6R6 413 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 FBXL12Q9NXK8 326 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 DDX56Q9NY93 547 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 WSB2Q9NYS7 404 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 NCDNQ9UBB6 729 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 IPO11Q9UI26 975 aaKnown RBP10.45□□□□□ -0.74
HDAC6-222ENST00000478095 GMEB2Q9UKD1 530 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 PPM1HQ9ULR3 514 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 CAPN6Q9Y6Q1 641 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 WASF2Q9Y6W5 498 aa10.45□□□□□ -0.74
HDAC6-222ENST00000478095 FAM47DPA6NHR8 397 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 C1QTNF3-AMACRE9PGA6 284 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 KPNA3O00505 521 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 KRIT1O00522 736 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 ALOX15BO15296 676 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 PSTPIP1O43586 416 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 LEFTY1O75610 366 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 PALMO75781 387 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 RHOBTB1O94844 696 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 ADH1BP00325 375 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 IGLV3-19P01714 112 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 PTMAP06454 111 aaKnown RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 CREB5Q02930 508 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 GBE1Q04446 702 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 CYTH1Q15438 398 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 INO80DQ53TQ3 878 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 KAZNQ674X7 775 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 MFSD7Q6UXD7 560 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 SLC36A4Q6YBV0 504 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 C11orf74Q86VG3 221 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 HDDC3Q8N4P3 179 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 ATPAF2Q8N5M1 289 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 LRRC57Q8N9N7 239 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 OR2AP1Q8NGE2 309 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 KIAA1524Q8TCG1 905 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 ANP32BQ92688 251 aaKnown RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 ZC3H10Q96K80 434 aaKnown RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 HSPA12BQ96MM6 686 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 GDAP1L1Q96MZ0 367 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 RNF157Q96PX1 679 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 BTBD1Q9H0C5 482 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 NEUROG2Q9H2A3 272 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 ARRDC1-AS1Q9H2J1 176 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 SMOC1Q9H4F8 434 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 HECAQ9UBI9 543 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 LHX3Q9UBR4 397 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 IL36AQ9UHA7 158 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 EVLQ9UI08 416 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 GUCA1BQ9UMX6 200 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 PACSIN2Q9UNF0 486 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-222ENST00000478095 NCKAP1Q9Y2A7 1128 aa10.44□□□□□ -0.74
HDAC6-222ENST00000478095 CXorf51AA0A1B0GTR3 108 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 APOL1O14791 398 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 INSIG1O15503 277 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 NRDCO43847 1150 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 MAFKO60675 156 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 EPN2O95208 641 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 FTCDO95954 541 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 IGSF6O95976 241 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 GSRP00390 522 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 PRNPP04156 253 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 RETP07949 1114 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CCDC175P0C221 793 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 KRT10P13645 584 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 C5AR1P21730 350 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 OXTRP30559 389 aa10.43□□□□□ -0.74
HDAC6-222ENST00000478095 CTNNA1P35221 906 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms