RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CMTM5Q96DZ9 223 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 ATXN7L3BQ96GX2 97 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 TBL1YQ9BQ87 522 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 APOL2Q9BQE5 337 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 THTPAQ9BU02 230 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
TMEM53-208ENST00000476724 GLOD4Q9HC38 313 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 NEU3Q9UQ49 428 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.7■□□□□ 0.26
TMEM53-208ENST00000476724 FNDC1Q4ZHG4 1894 aaPredicted RBP16.7■□□□□ 0.26
TMEM53-208ENST00000476724 PATJQ8NI35 1801 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 DFFAO00273 331 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 NVLO15381 856 aaKnown RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 KRT36O76013 467 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 HSPA4LO95757 839 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 PRDX6P30041 224 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 SMAD1Q15797 465 aaKnown RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 MUM1Q2TAK8 710 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 MANEALQ5VSG8 457 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 SNX30Q5VWJ9 437 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 OTOP3Q7RTS5 596 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 MAVSQ7Z434 540 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 ZC3HC1Q86WB0 502 aaKnown RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 SPATA2LQ8IUW3 424 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 ARHGAP12Q8IWW6 846 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 LMNTD2Q8IXW0 634 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 TNS4Q8IZW8 715 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 PPFIBP2Q8ND30 876 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 AZIN2Q96A70 460 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 CASD1Q96PB1 797 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 PGLYRP2Q96PD5 576 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 CDH19Q9H159 772 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 MRM3Q9HC36 420 aaKnown RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 ENTPD7Q9NQZ7 604 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 UBP1Q9NZI7 540 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 FNIP2Q9P278 1114 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 PCDH10Q9P2E7 1040 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 ANGPTL2Q9UKU9 493 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 MICAL3Q7RTP6 2002 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 PAGE1O75459 146 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 OR4Q2P0C623 313 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 CPOXP36551 454 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 COPAP53621 1224 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 ACTR3P61158 418 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 NRG1Q02297 640 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 CFAP157Q5JU67 520 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 EPGNQ6UW88 154 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 CNTN4Q8IWV2 1026 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 CRIPAKQ8N1N5 446 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 FBXO27Q8NI29 283 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 FAM193BQ96PV7 902 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-208ENST00000476724 GPAMQ9HCL2 828 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 OXSMQ9NWU1 459 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 PCDHB8Q9UN66 801 aa16.69■□□□□ 0.26
TMEM53-208ENST00000476724 MAFKO60675 156 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 TBX10O75333 385 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 COL6A1P12109 1028 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 ARRB2P32121 409 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 YWHAHQ04917 246 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-208ENST00000476724 SLC12A1Q13621 1099 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 ATG14Q6ZNE5 492 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 LRRC74BQ6ZQY2 392 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 ABI1Q8IZP0 508 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 PPHLN1Q8NEY8 458 aaKnown RBP16.68■□□□□ 0.26
TMEM53-208ENST00000476724 SCAMP5Q8TAC9 235 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 USP33Q8TEY7 942 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 ILKAPQ9H0C8 392 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-208ENST00000476724 CAB39LQ9H9S4 337 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 SLC39A10Q9ULF5 831 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 TMEM189-UBE2V1I3L0A0 370 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 TNFRSF10BO14763 440 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 CXCL10P02778 98 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 GRIK1P39086 918 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 SLC5A3P53794 718 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 BLMHQ13867 455 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 GRM3Q14832 879 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 DLG2Q15700 870 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 ZYG11AQ6WRX3 759 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 STON2Q8WXE9 905 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 MIEF2Q96C03 454 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 FCRL2Q96LA5 508 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-208ENST00000476724 SLC39A8Q9C0K1 460 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 NMRK1Q9NWW6 199 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 SLC7A8Q9UHI5 535 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 LRFN2Q9ULH4 789 aa16.68■□□□□ 0.26
TMEM53-208ENST00000476724 MAGED2Q9UNF1 606 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-208ENST00000476724 FKBP6O75344 327 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 PAMP19021 973 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 PBX3P40426 434 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 IRF9Q00978 393 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 USP10Q14694 798 aaKnown RBP16.67■□□□□ 0.26
TMEM53-208ENST00000476724 C1orf74Q96LT6 269 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 C1QTNF1Q9BXJ1 281 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 ACE2Q9BYF1 805 aaPredicted RBP16.67■□□□□ 0.26
TMEM53-208ENST00000476724 COG4Q9H9E3 785 aa16.67■□□□□ 0.26
TMEM53-208ENST00000476724 ATP11BQ9Y2G3 1177 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms