RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RAB7BQ96AH8 199 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 FAM131CQ96AQ9 280 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 SERAC1Q96JX3 654 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 GDAP1L1Q96MZ0 367 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 HDAC8Q9BY41 377 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 DHX35Q9H5Z1 703 aaKnown RBP10.41□□□□□ -0.74
CCM2-208ENST00000476594 ZDHHC6Q9H6R6 413 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 FSCN3Q9NQT6 498 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 GDF3Q9NR23 364 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 MYO1AQ9UBC5 1043 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 HECAQ9UBI9 543 aaPredicted RBP10.41□□□□□ -0.74
CCM2-208ENST00000476594 IP6K2Q9UHH9 426 aa10.41□□□□□ -0.74
CCM2-208ENST00000476594 PCDH15Q96QU1 1955 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 RASA4BC9J798 803 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 PRAMEF26H0Y7S4 382 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 H3BRJ5 948 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 K7ERQ8 282 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 RASA4O43374 803 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 LATO43561 262 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 LEFTY1O75610 366 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 PCDH8O95206 1070 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 POP4O95707 220 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 GLDCP23378 1020 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 ITGB7P26010 798 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 AKT2P31751 481 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 CASP14P31944 242 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 ACVRL1P37023 503 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 CCNHP51946 323 aaPredicted RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 RHOAP61586 193 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 HADHQ16836 314 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 ZNF423Q2M1K9 1284 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 HLA-BQ31612 363 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 RAB6CQ53S08 254 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 BOLA3Q53S33 107 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 N4BP2L1Q5TBK1 243 aaPredicted RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 AGBL4Q5VU57 503 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 E4F1Q66K89 784 aaPredicted RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 KIAA1161Q6NSJ0 714 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 ALKBH5Q6P6C2 394 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 DPY19L3Q6ZPD9 716 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 NAXDQ8IW45 347 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 UMODL1-AS1Q8N2C9 162 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 LZTR1Q8N653 840 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 C1orf216Q8TAB5 229 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 SETD7Q8WTS6 366 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 FEM1CQ96JP0 617 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 CDC6Q99741 560 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 TM6SF2Q9BZW4 377 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 XPO4Q9C0E2 1151 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 RAB6CQ9H0N0 254 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 TNKS2Q9H2K2 1166 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 SARDHQ9UL12 918 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
CCM2-208ENST00000476594 NUMA1Q14980 2115 aa10.4□□□□□ -0.74
CCM2-208ENST00000476594 MYO1FO00160 1098 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 KRIT1O00522 736 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 NEMP1O14524 444 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 AP1G1O43747 822 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 GJB3O75712 270 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 GYPCP04921 128 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 XPAP23025 273 aaPredicted RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 MIPP30301 263 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 SERPINB6P35237 376 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 GRK6P43250 576 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 RPS21P63220 83 aaKnown RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 SIM1P81133 766 aaPredicted RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 OGDHQ02218 1023 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 SERINC3Q13530 473 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 KIF19Q2TAC6 998 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 POM121L1PQ3SYA9 428 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 HS1BP3Q53T59 392 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 PPP6R3Q5H9R7 873 aaPredicted RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 CCDC122Q5T0U0 273 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 CFAP58Q5T655 872 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 HGSNATQ68CP4 663 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 RFX8Q6ZV50 586 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 PIP4P1Q86T03 277 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 HORMAD1Q86X24 394 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 PYROXD2Q8N2H3 581 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 BBS5Q8N3I7 341 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 PAF1Q8N7H5 531 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 MFSD2AQ8NA29 543 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 OR8K1Q8NGG5 319 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 SLC6A18Q96N87 628 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 SNRNP25Q9BV90 132 aaKnown RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 SP110Q9HB58 689 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 NDFIP2Q9NV92 336 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 HAUS2Q9NVX0 235 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 UBA2Q9UBT2 640 aaPredicted RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 PCSK1NQ9UHG2 260 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 ANAPC7Q9UJX3 599 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 NEU3Q9UQ49 428 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 APOBEC2Q9Y235 224 aaKnown RBP10.39□□□□□ -0.75
CCM2-208ENST00000476594 SNX11Q9Y5W9 270 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 WASF2Q9Y6W5 498 aa10.39□□□□□ -0.75
CCM2-208ENST00000476594 ASCC3Q8N3C0 2202 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms