RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 BMFQ96LC9 184 aa12.87□□□□□ -0.35
SKA3-206ENST00000475251 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
SKA3-206ENST00000475251 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
SKA3-206ENST00000475251 RRN3Q9NYV6 651 aa12.87□□□□□ -0.35
SKA3-206ENST00000475251 SPASTQ9UBP0 616 aa12.87□□□□□ -0.35
SKA3-206ENST00000475251 VPS51Q9UID3 782 aa12.87□□□□□ -0.35
SKA3-206ENST00000475251 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 AP1G1O43747 822 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 PAGE1O75459 146 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 LEFTY1O75610 366 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 TNFSF15O95150 251 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
SKA3-206ENST00000475251 MT-CO1P00395 513 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ADRB3P13945 408 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 RRM1P23921 792 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ITGB7P26010 798 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 SLC20A2Q08357 652 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 PDE1CQ14123 709 aaPredicted RBP12.86□□□□□ -0.35
SKA3-206ENST00000475251 SPIDRQ14159 915 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 TAF5Q15542 800 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ARL13BQ3SXY8 428 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ARSIQ5FYB1 569 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 C22orf39Q6P5X5 142 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 LRRC31Q6UY01 552 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 DENND6BQ8NEG7 585 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 LMX1AQ8TE12 382 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 TBATAQ96M53 351 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
SKA3-206ENST00000475251 PSMB7Q99436 277 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ARHGAP9Q9BRR9 750 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
SKA3-206ENST00000475251 BOCQ9BWV1 1114 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 SIK2Q9H0K1 926 aa12.86□□□□□ -0.35
SKA3-206ENST00000475251 ATXN7L1Q9ULK2 861 aaPredicted RBP12.86□□□□□ -0.35
SKA3-206ENST00000475251 MYO18BQ8IUG5 2567 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 BICDL2A1A5D9 508 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 POM121BA6NF01 834 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 M0QYT0 321 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 TSPAN6O43657 245 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 SNAP91O60641 907 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 GJB6O95452 261 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 GNA14O95837 355 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 SFTPCP11686 197 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 L1CAMP32004 1257 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 NOS2P35228 1153 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 IRAK1P51617 712 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 THOP1P52888 689 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 INHBCP55103 352 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 CLN3Q13286 438 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 ESRP1Q6NXG1 681 aaKnown RBP12.85□□□□□ -0.35
SKA3-206ENST00000475251 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 ZNF783Q6ZMS7 281 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
SKA3-206ENST00000475251 PCDH20Q8N6Y1 951 aaKnown RBP12.85□□□□□ -0.35
SKA3-206ENST00000475251 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 ASB12Q8WXK4 309 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 RAB7BQ96AH8 199 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 ARHGEF26Q96DR7 871 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 PRR11Q96HE9 360 aaPredicted RBP12.85□□□□□ -0.35
SKA3-206ENST00000475251 PPP1R13BQ96KQ4 1090 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 KREMEN1Q96MU8 473 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 HEPHQ9BQS7 1158 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 UBE2TQ9NPD8 197 aaPredicted RBP12.85□□□□□ -0.35
SKA3-206ENST00000475251 APOBEC3BQ9UH17 382 aaKnown RBP12.85□□□□□ -0.35
SKA3-206ENST00000475251 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
SKA3-206ENST00000475251 K7ERQ8 282 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 NEMP1O14524 444 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 MUSKO15146 869 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 DAB1O75553 588 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 ADCY5O95622 1261 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 AFPP02771 609 aaKnown RBP12.84□□□□□ -0.35
SKA3-206ENST00000475251 ITGB2P05107 769 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 ANXA6P08133 673 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 OR1E1P30953 314 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 LINGO4Q6UY18 593 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 ZDHHC17Q8IUH5 632 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 LIN37Q96GY3 246 aaPredicted RBP12.84□□□□□ -0.35
SKA3-206ENST00000475251 CPXM1Q96SM3 734 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 CCDC3Q9BQI4 270 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 SLC13A1Q9BZW2 595 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 STRADBQ9C0K7 418 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
SKA3-206ENST00000475251 TKTL2Q9H0I9 626 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 TNKS2Q9H2K2 1166 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 SYNCQ9H7C4 482 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 SYNDIG1Q9H7V2 258 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 ARHGEF38Q9NXL2 777 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 IL17BQ9UHF5 180 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 PCDHGA7Q9Y5G6 932 aa12.84□□□□□ -0.35
SKA3-206ENST00000475251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms