RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ARMC2Q8NEN0 867 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 SPATA22Q8NHS9 363 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 IGSF8Q969P0 613 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 TADA1Q96BN2 335 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 MFSD3Q96ES6 412 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 MRGPRX2Q96LB1 330 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 POLR1EQ9GZS1 481 aaKnown RBP22.08■■□□□ 1.13
CCM2-206ENST00000474617 RC3H2Q9HBD1 1191 aaKnown RBP22.08■■□□□ 1.13
CCM2-206ENST00000474617 MAGED2Q9UNF1 606 aaPredicted RBP22.08■■□□□ 1.13
CCM2-206ENST00000474617 ANKRD65E5RJM6 399 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 H2AFYO75367 372 aaKnown RBP22.07■■□□□ 1.12
CCM2-206ENST00000474617 COL6A2P12110 1019 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 WNT3AP56704 352 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 HSP90AA5PQ58FG0 334 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 ALG1LQ6GMV1 187 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 ZNF783Q6ZMS7 281 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 ITIH5Q86UX2 942 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 UNC5BQ8IZJ1 945 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 VN1R3Q9BXE9 311 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 UBP1Q9NZI7 540 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 ATP11BQ9Y2G3 1177 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 PSAT1Q9Y617 370 aa22.07■■□□□ 1.12
CCM2-206ENST00000474617 WDR91A4D1P6 747 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 PLIN3O60664 434 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 CNTN5O94779 1100 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 MT-CYBP00156 380 aaPredicted RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 HMGA1P17096 107 aaKnown RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 ELF1P32519 619 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 RASSF2P50749 326 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 PRKAA2P54646 552 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 LBRQ14739 615 aaKnown RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 SETD3Q86TU7 594 aaPredicted RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 TCEAL8Q8IYN2 117 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 ZNF333Q96JL9 665 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 GPR22Q99680 433 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 SNX15Q9NRS6 342 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 THAP1Q9NVV9 213 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 YIPF1Q9Y548 306 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 ASB3Q9Y575 518 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 ADAM12O43184 909 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 UBOX5O94941 541 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 TIMP1P01033 207 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 BGNP21810 368 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 SERPINH1P50454 418 aaKnown RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 TMPRSS15P98073 1019 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 PABPC1LQ4VXU2 614 aaKnown RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 NADSYN1Q6IA69 706 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 FSTL4Q6MZW2 842 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 HERC6Q8IVU3 1022 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 DCLK2Q8N568 766 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 FITM2Q8N6M3 262 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 RDH11Q8TC12 318 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 PABPC5Q96DU9 382 aaKnown RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 TSNARE1Q96NA8 513 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 APOL2Q9BQE5 337 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 STN1Q9H668 368 aaKnown RBP22.06■■□□□ 1.12
CCM2-206ENST00000474617 CYP4F11Q9HBI6 524 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 NT5MQ9NPB1 228 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 SAR1AQ9NR31 198 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 TREX1Q9NSU2 369 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 KCNK4Q9NYG8 393 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 RIMKLBQ9ULI2 386 aa22.06■■□□□ 1.12
CCM2-206ENST00000474617 COL4A6Q14031 1691 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 ILVBLA1L0T0 632 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 SNNO75324 88 aaPredicted RBP22.05■■□□□ 1.12
CCM2-206ENST00000474617 PMPCBO75439 489 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 HLA-DPA1P20036 260 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 NMBRP28336 390 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 EPHB3P54753 998 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 OLIG2Q13516 323 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 THOC5Q13769 683 aaKnown RBP22.05■■□□□ 1.12
CCM2-206ENST00000474617 CES3Q6UWW8 571 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 ZNF354CQ86Y25 554 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 CRLF3Q8IUI8 442 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 LGI2Q8N0V4 545 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 PTPRN2Q92932 1015 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 PSMG2Q969U7 264 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 ZNF419Q96HQ0 510 aaPredicted RBP22.05■■□□□ 1.12
CCM2-206ENST00000474617 FEM1CQ96JP0 617 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 RMDN2Q96LZ7 410 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 C11orf49Q9H6J7 331 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 IARS2Q9NSE4 1012 aaKnown RBP22.05■■□□□ 1.12
CCM2-206ENST00000474617 STOML2Q9UJZ1 356 aa22.05■■□□□ 1.12
CCM2-206ENST00000474617 KIAA0355O15063 1070 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 DNAJC6O75061 913 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 HMBSP08397 361 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 TPH1P17752 444 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 GJA8P48165 433 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 OCRLQ01968 901 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 SLC10A7Q0GE19 358 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 ZNF235Q14590 738 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 TAF1BQ53T94 588 aaPredicted RBP22.04■■□□□ 1.12
CCM2-206ENST00000474617 N4BP2L1Q5TBK1 243 aaPredicted RBP22.04■■□□□ 1.12
CCM2-206ENST00000474617 TMEM199Q8N511 208 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 PPP1R14CQ8TAE6 165 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 ARMC5Q96C12 935 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 VPS39Q96JC1 886 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 NPHS2Q9NP85 383 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 SEPT3Q9UH03 358 aa22.04■■□□□ 1.12
CCM2-206ENST00000474617 A0A1B0GVM2 712 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms