RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 OR12D3Q9UGF7 316 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 VAV3Q9UKW4 847 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 KCNE2Q9Y6J6 123 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 ATXN2Q99700 1313 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 TEX33O43247 280 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SPAG7O75391 227 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FKBP9O95302 570 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 EPHX1P07099 455 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 EPB42P16452 691 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 NR1D1P20393 614 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 TACR2P21452 398 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 HOXC12P31275 282 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 L1CAMP32004 1257 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CHI3L1P36222 383 aaPredicted RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SPAM1P38567 509 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 PBX3P40426 434 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 HSPA13P48723 471 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 STXBP1P61764 594 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 GPR33Q49SQ1 333 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 ZC3H12BQ5HYM0 836 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 ANXA8L1Q5VT79 327 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 PIGZQ86VD9 579 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 STAG3L4Q8TBR4 150 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 MIPOL1Q8TD10 442 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 ACTRT1Q8TDG2 376 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 ACMSDQ8TDX5 336 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 HASPINQ8TF76 798 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CLP1Q92989 425 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SIPA1Q96FS4 1042 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 MBOAT7Q96N66 472 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 AGAP3Q96P47 875 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 EPB41L1Q9H4G0 881 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 PDZD7Q9H5P4 517 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SDHAF3Q9NRP4 125 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SEMA3GQ9NS98 782 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 RBM12Q9NTZ6 932 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CALML5Q9NZT1 146 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 YIPF1Q9Y548 306 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 PCDHGA2Q9Y5H1 932 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 NRXN3Q9Y4C0 1643 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 A0A0A0MRY4 1105 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FAM234BA2RU67 622 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 RGSL1A5PLK6 1076 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 TAF4O00268 1085 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CCL16O15467 120 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 RASSF9O75901 435 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 TM7SF2O76062 418 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FGF18O76093 207 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 C4BP0C0L5 1744 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FDPSP14324 419 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CCNCP24863 283 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SOAT1P35610 550 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 DHPSP49366 369 aaPredicted RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 GPR15P49685 360 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 NUP107P57740 925 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 OCA2Q04671 838 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 MMRN1Q13201 1228 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CAPN13Q6MZZ7 669 aaPredicted RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FAM92BQ6ZTR7 304 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 UBE2R2Q712K3 238 aaPredicted RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SLC26A9Q7LBE3 791 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 LUZP2Q86TE4 346 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SERINC5Q86VE9 423 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SLC26A11Q86WA9 606 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FAM131BQ86XD5 332 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 DENND1CQ8IV53 801 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 UBALD2Q8IYN6 164 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 FSTL5Q8N475 847 aaPredicted RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 GPT2Q8TD30 523 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 KCNV2Q8TDN2 545 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 C7orf43Q8WVR3 580 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 HLA-CQ95604 372 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 NTAN1Q96AB6 310 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SPATA13Q96N96 652 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 SLC38A3Q99624 504 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 THUMPD1Q9NXG2 353 aaKnown RBP4.68□□□□□ -1.66
CCNL1-215ENST00000474539 OBP2AQ9NY56 170 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 CNTN3Q9P232 1028 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 OPTCQ9UBM4 332 aa4.68□□□□□ -1.66
CCNL1-215ENST00000474539 MYOM1P52179 1685 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 KCPQ6ZWJ8 1503 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 GSAPA4D1B5 854 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CFAP73A6NFT4 308 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ARL5CA6NH57 179 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CER1O95813 267 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CHRNA1P02708 482 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CCNYL3P0C7X3 344 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 SLC9A1P19634 815 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 MAGEA4P43358 317 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 DGKEP52429 567 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PDE1CQ14123 709 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 AP5B1Q2VPB7 878 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 VPS26BQ4G0F5 336 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 HP1BP3Q5SSJ5 553 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-215ENST00000474539 STXBP5Q5T5C0 1151 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 PRR23BQ6ZRT6 265 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF461Q8TAF7 563 aa4.67□□□□□ -1.66
CCNL1-215ENST00000474539 CLEC4DQ8WXI8 215 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms