RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 A0A1W2PR77 199 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 ZSCAN5CA6NGD5 496 aaPredicted RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 RNF103O00237 685 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 BUB1O43683 1085 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 DFNA5O60443 496 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 POP4O95707 220 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 WNT1P04628 370 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 GYPCP04921 128 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 CD38P28907 300 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 MAT2AP31153 395 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 CTSKP43235 329 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 CCNHP51946 323 aaPredicted RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 TPI1P60174 286 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 FAM193AP78312 1265 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 SIM1P81133 766 aaPredicted RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 SHC2P98077 582 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 SERINC3Q13530 473 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 NFKBIBQ15653 356 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 PARP15Q460N3 678 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 INO80DQ53TQ3 878 aaPredicted RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 SLC45A4Q5BKX6 768 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 NEK5Q6P3R8 708 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 LEKR1Q6ZMV7 388 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 DBX2Q6ZNG2 339 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 ERN2Q76MJ5 926 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 ZNF354CQ86Y25 554 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 PSTKQ8IV42 348 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 NAXDQ8IW45 347 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 XPO4Q9C0E2 1151 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 GPATCH2LQ9NWQ4 482 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 DONSONQ9NYP3 566 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 DMTF1Q9Y222 760 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
CKS1B-206ENST00000474215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.39□□□□□ -0.59
CKS1B-206ENST00000474215 DOCK4Q8N1I0 1966 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 A0A087X0T9 212 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 RASA4BC9J798 803 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 H0Y8X5 98 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 KRIT1O00522 736 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 RASA4O43374 803 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 PRPSAP2O60256 369 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 RNGTTO60942 597 aaKnown RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 LRCH4O75427 683 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 GSRP00390 522 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 FAM228BP0C875 321 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 ITGB7P26010 798 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 MIPP30301 263 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 CASP14P31944 242 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 NDST2P52849 883 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 SNRPD1P62314 119 aaKnown RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 SUZ12Q15022 739 aaKnown RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 ACAP1Q15027 740 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 CA9Q16790 459 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 ZNF423Q2M1K9 1284 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 MYLK3Q32MK0 819 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 SETMARQ53H47 684 aaPredicted RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 NAPEPLDQ6IQ20 393 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 FBXL19Q6PCT2 694 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 RYBPQ8N488 228 aaPredicted RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 MFSD2AQ8NA29 543 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 OR2AP1Q8NGE2 309 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 SETD7Q8WTS6 366 aaKnown RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 CASKIN2Q8WXE0 1202 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 HMCESQ96FZ2 354 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 LRIG1Q96JA1 1093 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 PEBP4Q96S96 227 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 SNRNP25Q9BV90 132 aaKnown RBP11.38□□□□□ -0.59
CKS1B-206ENST00000474215 TM6SF2Q9BZW4 377 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 KLC2Q9H0B6 622 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 TSPY26PQ9H489 355 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 ZDHHC6Q9H6R6 413 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 PCOLCE2Q9UKZ9 415 aa11.38□□□□□ -0.59
CKS1B-206ENST00000474215 A0A1W2PQU0 124 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PRAMEF26H0Y7S4 382 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 TLR4O00206 839 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 EEF2KO00418 725 aaKnown RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 FLRT2O43155 660 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 DAPK3O43293 454 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PCDHGA12O60330 932 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CBFA2T3O75081 653 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PCDH8O95206 1070 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 HNRNPH3P31942 346 aaKnown RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PCK1P35558 622 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 HCAR3P49019 387 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CCT8P50990 548 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 NEK3P51956 506 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 FOXC1Q12948 553 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 STAT4Q14765 748 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 ZNF284Q2VY69 593 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 BOLA3Q53S33 107 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PPP6R3Q5H9R7 873 aaPredicted RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 PRAMEF14Q5SWL7 426 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 SPECC1LQ69YQ0 1117 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms