RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 GCNT7Q6ZNI0 430 aa20.68■□□□□ 0.9
APP-215ENST00000474136 PPM1KQ8N3J5 372 aa20.68■□□□□ 0.9
APP-215ENST00000474136 ATXN7L3BQ96GX2 97 aa20.68■□□□□ 0.9
APP-215ENST00000474136 BTN2A3PQ96KV6 586 aa20.68■□□□□ 0.9
APP-215ENST00000474136 PANX2Q96RD6 677 aa20.68■□□□□ 0.9
APP-215ENST00000474136 PRMT1Q99873 361 aaKnown RBP20.68■□□□□ 0.9
APP-215ENST00000474136 ZNHIT6Q9NWK9 470 aaKnown RBP20.68■□□□□ 0.9
APP-215ENST00000474136 DNAJC12Q9UKB3 198 aa20.68■□□□□ 0.9
APP-215ENST00000474136 RNF103O00237 685 aa20.67■□□□□ 0.9
APP-215ENST00000474136 SCAMP1O15126 338 aa20.67■□□□□ 0.9
APP-215ENST00000474136 MFAP3LO75121 409 aa20.67■□□□□ 0.9
APP-215ENST00000474136 RBMS1P29558 406 aaKnown RBP20.67■□□□□ 0.9
APP-215ENST00000474136 IRAK1P51617 712 aa20.67■□□□□ 0.9
APP-215ENST00000474136 SKOR1P84550 965 aa20.67■□□□□ 0.9
APP-215ENST00000474136 CENPCQ03188 943 aa20.67■□□□□ 0.9
APP-215ENST00000474136 OR6B2Q6IFH4 312 aa20.67■□□□□ 0.9
APP-215ENST00000474136 PRICKLE2Q7Z3G6 844 aa20.67■□□□□ 0.9
APP-215ENST00000474136 HORMAD1Q86X24 394 aa20.67■□□□□ 0.9
APP-215ENST00000474136 PRR11Q96HE9 360 aaPredicted RBP20.67■□□□□ 0.9
APP-215ENST00000474136 SLC46A1Q96NT5 459 aa20.67■□□□□ 0.9
APP-215ENST00000474136 NAA15Q9BXJ9 866 aaKnown RBP20.67■□□□□ 0.9
APP-215ENST00000474136 ST7Q9NRC1 585 aa20.67■□□□□ 0.9
APP-215ENST00000474136 DNAJC28Q9NX36 388 aa20.67■□□□□ 0.9
APP-215ENST00000474136 SLC25A13Q9UJS0 675 aa20.67■□□□□ 0.9
APP-215ENST00000474136 ZFR2Q9UPR6 939 aaKnown RBP20.67■□□□□ 0.9
APP-215ENST00000474136 TCAF2A6NFQ2 919 aa20.66■□□□□ 0.9
APP-215ENST00000474136 ALOX15BO15296 676 aa20.66■□□□□ 0.9
APP-215ENST00000474136 TRUB2O95900 331 aaKnown RBP20.66■□□□□ 0.9
APP-215ENST00000474136 HNRNPA2B1P22626 353 aaKnown RBP20.66■□□□□ 0.9
APP-215ENST00000474136 AKT2P31751 481 aa20.66■□□□□ 0.9
APP-215ENST00000474136 STAT1P42224 750 aa20.66■□□□□ 0.9
APP-215ENST00000474136 VASPP50552 380 aaPredicted RBP20.66■□□□□ 0.9
APP-215ENST00000474136 DUSP3P51452 185 aaPredicted RBP20.66■□□□□ 0.9
APP-215ENST00000474136 CDKN3Q16667 212 aa20.66■□□□□ 0.9
APP-215ENST00000474136 SEL1L3Q68CR1 1132 aa20.66■□□□□ 0.9
APP-215ENST00000474136 IGF2-ASQ6U949 168 aa20.66■□□□□ 0.9
APP-215ENST00000474136 ARRDC3Q96B67 414 aa20.66■□□□□ 0.9
APP-215ENST00000474136 DNAJC7Q99615 494 aa20.66■□□□□ 0.9
APP-215ENST00000474136 FEM1AQ9BSK4 669 aa20.66■□□□□ 0.9
APP-215ENST00000474136 TRIM4Q9C037 500 aa20.66■□□□□ 0.9
APP-215ENST00000474136 NLRC4Q9NPP4 1024 aa20.66■□□□□ 0.9
APP-215ENST00000474136 ENTPD2Q9Y5L3 495 aa20.66■□□□□ 0.9
APP-215ENST00000474136 CPED1A4D0V7 1026 aa20.65■□□□□ 0.9
APP-215ENST00000474136 NEMP2A6NFY4 417 aa20.65■□□□□ 0.9
APP-215ENST00000474136 KCNU1A8MYU2 1149 aa20.65■□□□□ 0.9
APP-215ENST00000474136 CASC3O15234 703 aaKnown RBP20.65■□□□□ 0.9
APP-215ENST00000474136 LZTS3O60299 673 aaPredicted RBP20.65■□□□□ 0.9
APP-215ENST00000474136 IGLV3-25P01717 112 aa20.65■□□□□ 0.9
APP-215ENST00000474136 GPD2P43304 727 aa20.65■□□□□ 0.9
APP-215ENST00000474136 RPL34P49207 117 aaKnown RBP20.65■□□□□ 0.9
APP-215ENST00000474136 RAPGEF1Q13905 1077 aa20.65■□□□□ 0.9
APP-215ENST00000474136 STILQ15468 1287 aa20.65■□□□□ 0.9
APP-215ENST00000474136 FBXL22Q6P050 247 aa20.65■□□□□ 0.9
APP-215ENST00000474136 GUSBP11Q6P575 273 aa20.65■□□□□ 0.9
APP-215ENST00000474136 FOXR1Q6PIV2 292 aa20.65■□□□□ 0.9
APP-215ENST00000474136 CRTC1Q6UUV9 634 aa20.65■□□□□ 0.9
APP-215ENST00000474136 Q6ZSR6 202 aa20.65■□□□□ 0.9
APP-215ENST00000474136 RRAGAQ7L523 313 aa20.65■□□□□ 0.9
APP-215ENST00000474136 ABI3BPQ7Z7G0 1075 aa20.65■□□□□ 0.9
APP-215ENST00000474136 ATP6V0D2Q8N8Y2 350 aa20.65■□□□□ 0.9
APP-215ENST00000474136 CCDC112Q8NEF3 446 aa20.65■□□□□ 0.9
APP-215ENST00000474136 OR51B4Q9Y5P0 310 aa20.65■□□□□ 0.9
APP-215ENST00000474136 FHOD1Q9Y613 1164 aa20.65■□□□□ 0.9
APP-215ENST00000474136 KPNA3O00505 521 aaPredicted RBP20.64■□□□□ 0.89
APP-215ENST00000474136 EPHB6O15197 1021 aa20.64■□□□□ 0.89
APP-215ENST00000474136 HNRNPH3P31942 346 aaKnown RBP20.64■□□□□ 0.89
APP-215ENST00000474136 EIF4EBP2Q13542 120 aaPredicted RBP20.64■□□□□ 0.89
APP-215ENST00000474136 DRAP1Q14919 205 aaPredicted RBP20.64■□□□□ 0.89
APP-215ENST00000474136 DENND1BQ6P3S1 775 aa20.64■□□□□ 0.89
APP-215ENST00000474136 CCDC81Q6ZN84 652 aa20.64■□□□□ 0.89
APP-215ENST00000474136 BEND5Q7L4P6 421 aa20.64■□□□□ 0.89
APP-215ENST00000474136 EFL1Q7Z2Z2 1120 aaKnown RBP20.64■□□□□ 0.89
APP-215ENST00000474136 PTAR1Q7Z6K3 402 aaPredicted RBP20.64■□□□□ 0.89
APP-215ENST00000474136 ARHGEF19Q8IW93 802 aa20.64■□□□□ 0.89
APP-215ENST00000474136 SH2D3CQ8N5H7 860 aa20.64■□□□□ 0.89
APP-215ENST00000474136 TC2NQ8N9U0 490 aa20.64■□□□□ 0.89
APP-215ENST00000474136 DUSP23Q9BVJ7 150 aa20.64■□□□□ 0.89
APP-215ENST00000474136 USP29Q9HBJ7 922 aa20.64■□□□□ 0.89
APP-215ENST00000474136 ABHD10Q9NUJ1 306 aa20.64■□□□□ 0.89
APP-215ENST00000474136 AIPL1Q9NZN9 384 aa20.64■□□□□ 0.89
APP-215ENST00000474136 BZW2Q9Y6E2 419 aaKnown RBP20.64■□□□□ 0.89
APP-215ENST00000474136 SART1O43290 800 aaKnown RBP20.63■□□□□ 0.89
APP-215ENST00000474136 PCDH8O95206 1070 aa20.63■□□□□ 0.89
APP-215ENST00000474136 MT-CO1P00395 513 aa20.63■□□□□ 0.89
APP-215ENST00000474136 GGCXP38435 758 aa20.63■□□□□ 0.89
APP-215ENST00000474136 ADKP55263 362 aaKnown RBP20.63■□□□□ 0.89
APP-215ENST00000474136 JAM2P57087 298 aa20.63■□□□□ 0.89
APP-215ENST00000474136 BPIFB4P59827 614 aa20.63■□□□□ 0.89
APP-215ENST00000474136 NFATC3Q12968 1075 aa20.63■□□□□ 0.89
APP-215ENST00000474136 CLN3Q13286 438 aa20.63■□□□□ 0.89
APP-215ENST00000474136 FZD2Q14332 565 aa20.63■□□□□ 0.89
APP-215ENST00000474136 RABGAP1LQ5R372 815 aa20.63■□□□□ 0.89
APP-215ENST00000474136 NEK5Q6P3R8 708 aa20.63■□□□□ 0.89
APP-215ENST00000474136 EXD3Q8N9H8 876 aa20.63■□□□□ 0.89
APP-215ENST00000474136 ZNF548Q8NEK5 533 aaPredicted RBP20.63■□□□□ 0.89
APP-215ENST00000474136 IFT43Q96FT9 208 aa20.63■□□□□ 0.89
APP-215ENST00000474136 BMFQ96LC9 184 aa20.63■□□□□ 0.89
APP-215ENST00000474136 RPRD1AQ96P16 312 aaPredicted RBP20.63■□□□□ 0.89
APP-215ENST00000474136 EVA1BQ9NVM1 165 aa20.63■□□□□ 0.89
APP-215ENST00000474136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms