RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 HNRNPKP61978 463 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAF4-209ENST00000473421 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 NFATC3Q12968 1075 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 PDE1CQ14123 709 aaPredicted RBP12.88□□□□□ -0.35
TRAF4-209ENST00000473421 ZSCAN23Q3MJ62 389 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 ARL13BQ3SXY8 428 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
TRAF4-209ENST00000473421 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 KYAT3Q6YP21 454 aaKnown RBP12.88□□□□□ -0.35
TRAF4-209ENST00000473421 PARS2Q7L3T8 475 aaKnown RBP12.88□□□□□ -0.35
TRAF4-209ENST00000473421 PRICKLE2Q7Z3G6 844 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 TRIM59Q8IWR1 403 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 MED15Q96RN5 788 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 CLPBQ9H078 707 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 ZNF212Q9UDV6 495 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 IL36AQ9UHA7 158 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 HS3ST3A1Q9Y663 406 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 BSNQ9UPA5 3926 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 NEMP2A6NFY4 417 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 M0QYT0 321 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 AGRPO00253 132 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 AQP9O43315 295 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 CLDN11O75508 207 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 RHOCP08134 193 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 ALPPL2P10696 532 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 ADRB3P13945 408 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 HGFP14210 728 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 JUNDP17535 347 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 ITIH2P19823 946 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 GNA15P30679 374 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 ABL2P42684 1182 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
TRAF4-209ENST00000473421 OXCT1P55809 520 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 TCEA2Q15560 299 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 RAB6CQ53S08 254 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 LRRC73Q5JTD7 316 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 OLFML1Q6UWY5 402 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 CCDC81Q6ZN84 652 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 CLEC14AQ86T13 490 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 OR6K2Q8NGY2 324 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 CRACR2AQ9BSW2 395 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 DUSP23Q9BVJ7 150 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 BOCQ9BWV1 1114 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 C1QTNF2Q9BXJ5 285 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 RAB6CQ9H0N0 254 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 RMND1Q9NWS8 449 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
TRAF4-209ENST00000473421 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
TRAF4-209ENST00000473421 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 DRGXA6NNA5 263 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 PRNPP04156 253 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 PNMA6AP0CW24 399 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-209ENST00000473421 SLC2A3P11169 496 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 WT1P19544 449 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-209ENST00000473421 SLC9A1P19634 815 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 ADKP55263 362 aaKnown RBP12.86□□□□□ -0.35
TRAF4-209ENST00000473421 STX17P56962 302 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 PFN3P60673 137 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 ARF5P84085 180 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■■□ 23.8
TRAF4-209ENST00000473421 PTPN20Q4JDL3 420 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 KCTD16Q68DU8 428 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 RBM44Q6ZP01 1051 aaKnown RBP12.86□□□□□ -0.35
TRAF4-209ENST00000473421 PARGQ86W56 976 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 DCAF4L2Q8NA75 395 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 NETO2Q8NC67 525 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
TRAF4-209ENST00000473421 CEP63Q96MT8 703 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 NPY6RQ99463 290 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 CCDC3Q9BQI4 270 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 SPON2Q9BUD6 331 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 LRRC61Q9BV99 259 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 TRIM62Q9BVG3 475 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 FOXP3Q9BZS1 431 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 SALL4Q9UJQ4 1053 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
TRAF4-209ENST00000473421 DOCK4Q8N1I0 1966 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 YY2O15391 372 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 P4HA2O15460 535 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 HSF2BPO75031 334 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 ITGB6P18564 788 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 ITGB7P26010 798 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 SLC5A2P31639 672 aa12.85□□□□□ -0.35
TRAF4-209ENST00000473421 L1CAMP32004 1257 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms