RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	DNAJC24	Q6P3W2	148 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	NLRP14	Q86W24	1093 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	PHF13	Q86YI8	300 aa	Predicted RBP	9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	EID2	Q8N6I1	236 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	ISG20	Q96AZ6	181 aa	Known RBP	9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	ARRDC3	Q96B67	414 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	ERGIC2	Q96RQ1	377 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	HEPH	Q9BQS7	1158 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	NAT10	Q9H0A0	1025 aa	Known RBP	9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	RAB6C	Q9H0N0	254 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	OSBPL2	Q9H1P3	480 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	CCDC86	Q9H6F5	360 aa	Known RBP	9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZDHHC6	Q9H6R6	413 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	TMEM248	Q9NWD8	314 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	FCF1	Q9Y324	198 aa	Known RBP	9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	CACNA1G	O43497	2377 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	TRPM6	Q9BX84	2022 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	CHD5	Q8TDI0	1954 aa		9.1	□□□□□ -0.95
CHEK2-223	ENST00000472807	ARID1B	Q8NFD5	2236 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ATRX	P46100	2492 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	LRRC10B	A6NIK2	292 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	SLC31A1	O15431	190 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	RAMP2	O60895	175 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZNF821	O75541	412 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	RFPL3	O75679	317 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZMPSTE24	O75844	475 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	LRIG2	O94898	1065 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	GJB6	O95452	261 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	C1S	P09871	688 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	THEGL	P0DJG4	465 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	CDK4	P11802	303 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ADRB3	P13945	408 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	HNRNPA2B1	P22626	353 aa	Known RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	RFC1	P35251	1148 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	HNF1B	P35680	557 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ACVRL1	P37023	503 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	RXRG	P48443	463 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	RPS21	P63220	83 aa	Known RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	TYRO3	Q06418	890 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	PTP4A2	Q12974	167 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	POLD3	Q15054	466 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	SHB	Q15464	509 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	SMAD1	Q15797	465 aa	Known RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZNF284	Q2VY69	593 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	HS1BP3	Q53T59	392 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	CARD16	Q5EG05	197 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	EFHC2	Q5JST6	749 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	KIAA1161	Q6NSJ0	714 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	FBXL19	Q6PCT2	694 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	DHRS13	Q6UX07	377 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	MON1B	Q7L1V2	547 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZSCAN30	Q86W11	494 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	PROSER1	Q86XN7	944 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	SPATS2	Q86XZ4	545 aa	Known RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZNF354C	Q86Y25	554 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	RYBP	Q8N488	228 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	AOPEP	Q8N6M6	819 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	CCDC185	Q8N715	623 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	TMEM145	Q8NBT3	493 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	CENPI	Q92674	756 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	KLK6	Q92876	244 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	NTAN1	Q96AB6	310 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	KLHDC7B	Q96G42	594 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	MCEE	Q96PE7	176 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	PCDHB18P	Q96TA0	734 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	AGPAT1	Q99943	283 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	MYOC	Q99972	504 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	TM6SF2	Q9BZW4	377 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	MAGEH1	Q9H213	219 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	HECA	Q9UBI9	543 aa	Predicted RBP	9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	DNAI1	Q9UI46	699 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	NEU3	Q9UQ49	428 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	CA5B	Q9Y2D0	317 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	PCDHGA1	Q9Y5H4	931 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	WASF2	Q9Y6W5	498 aa		9.09	□□□□□ -0.95
CHEK2-223	ENST00000472807	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	SIGLEC16	A6NMB1	481 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807		A6NNZ2	444 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	FAM72C	H0Y354	149 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	CCP110	O43303	1012 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	SDC3	O75056	442 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	GSR	P00390	522 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	FER	P16591	822 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	EPHB2	P29323	1055 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	L1CAM	P32004	1257 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	ACADVL	P49748	655 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	ZNF143	P52747	638 aa	Predicted RBP	9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	AIF1	P55008	147 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	BNIP3	Q12983	259 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	DNAJC3	Q13217	504 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	TMEM259	Q4ZIN3	620 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	FAM72A	Q5TYM5	149 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	SFMBT2	Q5VUG0	894 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	SEL1L3	Q68CR1	1132 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	FAM72D	Q6L9T8	149 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	PPP1R2P3	Q6NXS1	205 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	SCYL2	Q6P3W7	929 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	DCUN1D2	Q6PH85	259 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	WDR59	Q6PJI9	974 aa		9.08	□□□□□ -0.96
CHEK2-223	ENST00000472807	PTAR1	Q7Z6K3	402 aa	Predicted RBP	9.08	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms