RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ENTPD8	Q5MY95	495 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	TMEM81	Q6P7N7	255 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	ZNF793	Q6ZN11	406 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	TRIM74	Q86UV6	250 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	TRIM73	Q86UV7	250 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	ANKRD13B	Q86YJ7	626 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	CNGA4	Q8IV77	575 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	KDM1B	Q8NB78	822 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	DNAAF1	Q8NEP3	725 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	C16orf52	Q8NHV5	167 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	MPLKIP	Q8TAP9	179 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	CENPI	Q92674	756 aa	Predicted RBP	4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	EME1	Q96AY2	570 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	MSI2	Q96DH6	328 aa	Known RBP	4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	PDCL3	Q9H2J4	239 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	SLC32A1	Q9H598	525 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	CXorf56	Q9H5V9	222 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	NRIP3	Q9NQ35	241 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	PEMT	Q9UBM1	199 aa		4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.09	□□□□□ -1.75
PTCD3-209	ENST00000472044	GAGE12J	A6NER3	117 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	CBY3	A6NI87	242 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	MYZAP	P0CAP1	466 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	CD72	P21854	359 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	ABCD1	P33897	745 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	CASP2	P42575	452 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	DPP6	P42658	865 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	CCR9	P51686	369 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	C21orf58	P58505	322 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	MTX1	Q13505	466 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	EZH2	Q15910	746 aa	Known RBP	4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	TST	Q16762	297 aa	Known RBP	4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	ME3	Q16798	604 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	EDRF1	Q3B7T1	1238 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044		Q4G0T1	1027 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	SLC9B1	Q4ZJI4	515 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	COLEC12	Q5KU26	742 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	C6orf10	Q5SRN2	563 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	TMTC3	Q6ZXV5	915 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	RRM2B	Q7LG56	351 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	PIP4P1	Q86T03	277 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	TADA2B	Q86TJ2	420 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	SERPINA11	Q86U17	422 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	CHD1L	Q86WJ1	897 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	ADGRF5	Q8IZF2	1346 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	DPP10	Q8N608	796 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	CMAS	Q8NFW8	434 aa	Predicted RBP	4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	PRSS3P2	Q8NHM4	247 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	SAAL1	Q96ER3	474 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	ZNF333	Q96JL9	665 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	TMEM79	Q9BSE2	394 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	TRMO	Q9BU70	441 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	USP44	Q9H0E7	712 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	SLC25A18	Q9H1K4	315 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	TASP1	Q9H6P5	420 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	MSRB1	Q9NZV6	116 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	KIAA1456	Q9P272	454 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	HSPB7	Q9UBY9	170 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	AASS	Q9UDR5	926 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	PCDHA12	Q9UN75	941 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	PCDHGB5	Q9Y5G0	923 aa		4.08	□□□□□ -1.76
PTCD3-209	ENST00000472044	RUSC2	Q8N2Y8	1516 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	EBAG9	O00559	213 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	ADAM10	O14672	748 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	USO1	O60763	962 aa	Known RBP	4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	IFNA2	P01563	188 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	FGB	P02675	491 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	KLKB1	P03952	638 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	CLEC3B	P05452	202 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	PTPN2	P17706	415 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	CHM	P24386	653 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	GPR12	P47775	334 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	DCAF7	P61962	342 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	YWHAZ	P63104	245 aa	Known RBP	4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	SLC18A2	Q05940	514 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	MTX3	Q5HYI7	312 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	SERTAD4-AS1	Q5TG53	156 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	ATG9B	Q674R7	924 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	ZNF626	Q68DY1	528 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	NCAPH2	Q6IBW4	605 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	SLC2A7	Q6PXP3	512 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	ATF7IP	Q6VMQ6	1270 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	FAM160B2	Q86V87	743 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	DIS3L2	Q8IYB7	885 aa	Known RBP	4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	BICD2	Q8TD16	824 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	UCMA	Q8WVF2	138 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	MPHOSPH8	Q99549	860 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	BRF2	Q9HAW0	419 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	TUBA8	Q9NY65	449 aa	Predicted RBP	4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	SEL1L	Q9UBV2	794 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	CDH22	Q9UJ99	828 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044	CAMK2A	Q9UQM7	478 aa		4.07	□□□□□ -1.76
PTCD3-209	ENST00000472044		A0A096LPK6	155 aa		4.06	□□□□□ -1.76
PTCD3-209	ENST00000472044	TEX13C	A0A0J9YWL9	993 aa		4.06	□□□□□ -1.76
PTCD3-209	ENST00000472044	PGPEP1L	A6NFU8	196 aa		4.06	□□□□□ -1.76

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