RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 C1orf61Q13536 156 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 PRRT3Q5FWE3 981 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 FOXD4L5Q5VV16 416 aaPredicted RBP19.41■□□□□ 0.7
SORT1-203ENST00000471996 ESRP1Q6NXG1 681 aaKnown RBP19.41■□□□□ 0.7
SORT1-203ENST00000471996 ZSCAN1Q8NBB4 408 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 GRIN3AQ8TCU5 1115 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 FOXD4L4Q8WXT5 416 aaPredicted RBP19.41■□□□□ 0.7
SORT1-203ENST00000471996 TBATAQ96M53 351 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 PSMB7Q99436 277 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 MUC3BQ9H195 1237 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 APOBEC3BQ9UH17 382 aaKnown RBP19.41■□□□□ 0.7
SORT1-203ENST00000471996 VANGL2Q9ULK5 521 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 FADS3Q9Y5Q0 445 aa19.41■□□□□ 0.7
SORT1-203ENST00000471996 A0A1B0GVL5 298 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 CLEC18AA5D8T8 446 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 SNAP91O60641 907 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 LEFTY1O75610 366 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 ANXA6P08133 673 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 ADRB3P13945 408 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 PFKFB1P16118 471 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 RRM1P23921 792 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 CCR1P32246 355 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 CLCN6P51797 869 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 CLCA4Q14CN2 919 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 CLEC18BQ6UXF7 455 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 VASH2Q86V25 355 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 ZSCAN30Q86W11 494 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 CLEC18CQ8NCF0 446 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 PPP1R13BQ96KQ4 1090 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 LRRC61Q9BV99 259 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 C2orf49Q9BVC5 232 aaPredicted RBP19.4■□□□□ 0.7
SORT1-203ENST00000471996 C1QTNF2Q9BXJ5 285 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 FOXP3Q9BZS1 431 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 VPS51Q9UID3 782 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 RP1P56715 2156 aa19.4■□□□□ 0.7
SORT1-203ENST00000471996 D6RAR5 112 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 YY2O15391 372 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 AP1G1O43747 822 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 JMJD7P0C870 316 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 WT1P19544 449 aaPredicted RBP19.39■□□□□ 0.69
SORT1-203ENST00000471996 CCKBRP32239 447 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 CYP4F2P78329 520 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 DPYDQ12882 1025 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 SGCGQ13326 291 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 SERINC3Q13530 473 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 MORC3Q14149 939 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 DPY19L3Q6ZPD9 716 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 PHACTR4Q8IZ21 702 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 HTR3CQ8WXA8 447 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 MED15Q96RN5 788 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 GFM1Q96RP9 751 aaKnown RBP19.39■□□□□ 0.69
SORT1-203ENST00000471996 FUCA2Q9BTY2 467 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 SLC4A5Q9BY07 1137 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 TNKS2Q9H2K2 1166 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 THAP9Q9H5L6 903 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 FAM204AQ9H8W3 233 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 PISDQ9UG56 409 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 RABGEF1Q9UJ41 708 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 RCOR1Q9UKL0 485 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 WASF2Q9Y6W5 498 aa19.39■□□□□ 0.69
SORT1-203ENST00000471996 ITGB7P26010 798 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 RECQLP46063 649 aaPredicted RBP19.38■□□□□ 0.69
SORT1-203ENST00000471996 CDH4P55283 916 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 PTK2BQ14289 1009 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 C5orf22Q49AR2 442 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 ATL3Q6DD88 541 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 C22orf39Q6P5X5 142 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 TMEM110Q86TL2 294 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 DENND6BQ8NEG7 585 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 ZNF564Q8TBZ8 553 aaPredicted RBP19.38■□□□□ 0.69
SORT1-203ENST00000471996 STK32AQ8WU08 396 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 ASB12Q8WXK4 309 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 KAT5Q92993 513 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 NT5C1BQ96P26 610 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 SLC13A1Q9BZW2 595 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 CLPBQ9H078 707 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 EPN3Q9H201 632 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 ADNPQ9H2P0 1102 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 DDIT4Q9NX09 232 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 PNMA8BQ9ULN7 279 aaPredicted RBP19.38■□□□□ 0.69
SORT1-203ENST00000471996 HPSEQ9Y251 543 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 HS3ST4Q9Y661 456 aa19.38■□□□□ 0.69
SORT1-203ENST00000471996 SYNJ2BP-COX16A0A087WUM0 186 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 IGLON5A6NGN9 336 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 E5RJQ4 531 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 SLC16A3O15427 465 aaKnown RBP19.37■□□□□ 0.69
SORT1-203ENST00000471996 TSHRP16473 764 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 CMA1P23946 247 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 L1CAMP32004 1257 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 CCL7P80098 99 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 FOXK1P85037 733 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 CDK17Q00537 523 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 MTA1Q13330 715 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 TAF5Q15542 800 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 LINGO4Q6UY18 593 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 DTX1Q86Y01 620 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 PTRH1Q86Y79 214 aaKnown RBP19.37■□□□□ 0.69
SORT1-203ENST00000471996 PPM1KQ8N3J5 372 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 ARL10Q8N8L6 244 aa19.37■□□□□ 0.69
SORT1-203ENST00000471996 SLC35C1Q96A29 364 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms